Juglans regia (English walnut): 109010368
Help
Entry
109010368 CDS
T05245
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
jre
Juglans regia (English walnut)
Pathway
jre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109010368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jre03400
]
109010368
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
109010368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
DUF6099
Motif
Other DBs
NCBI-GeneID:
109010368
NCBI-ProteinID:
XP_018846726
UniProt:
A0A2I4GS49
LinkDB
All DBs
Position
12:complement(6873040..6877276)
Genome browser
AA seq
652 aa
AA seq
DB search
MAAMEKREEEGRVRVLIEKATNSTAPEVDPRLLKAIKLVVRYSDSELRLAARTLMALMKR
DHSQVRYLTLLIIDELFMRSKLFRTVLVENLDQLLSLSVGFRRNLPLPAPPAVASVLRSK
AIEFLEKWNTSFGVHYRQLRLGFDYLKNTLKFQFPNLQAHAARIQQERSERERRSKEILL
NKFEMLKENFSSIKEEIKLTIDEIGECLDIVCTKEEFMPPGPLDDEDFVEFRSSELLQIR
LNTLKEGGKVHENSENKVVFDVLRELYKLLVTKHLVSVQEWISVLVRVEVADIRFRDSVL
KELIDIRNNLISVKKKCEESGCALVTIANHDEEDEDFWEEGKIGSLENGRSAVPDKQNED
ISMASTSSELKNRTPEGSNRDCNDNEMLNREDDETDSNPLRGKLLAEAPVMEWGSFLDNW
GSSREVLANQRGLELESHWGRVDYNAVIPAEKIAELNVHATLYKEEPTETQPCRAPLRKG
GVCQRKDLRVCPFHGPIVPRDDEGKPLNQNPLKDEITLDSRIDLVEQLAKQAVKNVRERD
KEVTNKREIDKQSMKRAKLAKIREHNAAVLRDAALASTSRSAAIGQDMEVTNSEKSSARN
KKETLSSMLRKKVTSKDRLAQRLLNTRVKDATVRELTSGEDANYREAFPNQW
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaatggagaagagagaagaggaagggagggttagggttttgatagagaaggcg
acgaactccacggctccggaggttgacccgcgacttctcaaggctatcaaattggtcgtt
cgatattcggattccgagctccgactcgctgcccgtacccttatggccctcatgaagcgg
gatcactctcaggtaaggtacctgacgcttctcataattgatgaactcttcatgcggtcg
aagcttttcagaaccgtccttgttgagaatttggatcagttactgagtttgagtgttggg
ttcagaagaaatctgcctctccctgctccaccagccgtggcatctgttttgcggtcgaag
gcaatcgaattcttggagaagtggaacacttcctttggggttcattacaggcagctcaga
ttaggatttgactaccttaaaaacaccctcaagtttcaatttcctaatctacaggcacat
gcagcacggattcagcaggagagaagcgaaagggaaaggaggtcaaaagagatattacta
aacaaatttgaaatgttgaaggagaatttctcatcaataaaggaagaaataaagttaacg
atagatgagattggggagtgtttagacattgtctgtacaaaagaggaattcatgccacca
ggtcctttagacgatgaagattttgtggagtttcgttcatctgaactgctgcaaatacgt
ctcaatactttaaaagaagggggaaaggttcatgaaaacagtgaaaataaagtggttttt
gatgtattgagggagctatacaagcttttagtgacaaagcatttggtttcagtccaagaa
tggatttccgttcttgtaagggttgaagtagcagacattaggttcagagattctgttttg
aaggagttaatcgacatccgaaataatctcatatcggtgaagaagaagtgtgaagagtcc
ggttgtgctcttgtgacgattgcaaatcatgatgaagaagatgaagatttctgggaggag
ggtaagattggatcacttgagaacgggagatctgctgtgcctgataagcaaaatgaagat
atttccatggcgtcaacatctagtgagttgaaaaatagaactcctgaaggcagtaataga
gattgtaatgacaatgaaatgctcaatcgtgaagatgatgaaactgattcaaaccctttg
aggggtaagcttctggctgaagctccagtgatggagtggggctctttcttagataactgg
ggttcaagcagggaggttttggctaaccagcggggattggagcttgagagtcactggggg
agagtggactataatgcagttattccagctgagaaaattgcagaattaaatgttcatgca
actctttacaaagaggagccgacggaaactcaaccatgccgtgctcctttgaggaaaggg
ggagtttgtcagagaaaagatttgagagtttgtccgtttcatggacctattgtaccccga
gatgatgaaggaaaaccactcaatcagaaccctttaaaagatgagataactcttgattca
aggattgatttagttgagcagctagcaaaacaagctgtgaagaatgttcgtgagagagat
aaagaggtaacaaacaagagagaaattgataaacagtcgatgaagcgcgcaaagcttgcc
aaaatcagggagcacaatgcagctgttctaagggatgctgcgttggcatcaacgtcaaga
tctgcagctattggacaagatatggaggtgactaacagtgagaaatcctcggccagaaac
aaaaaggaaacactgtcgtccatgctgcgtaagaaagttacatcgaaagataggttagct
cagaggcttttgaatacgagagtgaaggatgcaacagtaagagagcttacatcaggtgaa
gatgcaaattaccgagaagcctttccaaatcaatggtaa
DBGET
integrated database retrieval system
