Juglans regia (English walnut): 109010990
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Entry
109010990 CDS
T05245
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
jre
Juglans regia (English walnut)
Pathway
jre03022
Basal transcription factors
jre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109010990
09124 Replication and repair
03420 Nucleotide excision repair
109010990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109010990
03400 DNA repair and recombination proteins [BR:
jre03400
]
109010990
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109010990
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109010990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
109010990
NCBI-ProteinID:
XP_018847538
UniProt:
A0A2I4GUJ2
LinkDB
All DBs
Position
2:complement(32266277..32269425)
Genome browser
AA seq
70 aa
AA seq
DB search
MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIYVLDNTHLFVQTHVAEMIRSAMADF
RDQNSYEKPT
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgcaactaaaggactgttcatttcctgtgacattcctatggcacaattcatc
atcaatttgaatgcctcgttgcctgcatcacagaagttcattatatatgtcttggataac
actcatctttttgtgcaaacccatgtggctgaaatgatacgaagcgccatggcagatttt
agggatcagaattcctatgagaagcctacttga
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