KEGG   Juglans regia (English walnut): 109011023
Entry
109011023         CDS       T05245                                 
Name
(RefSeq) uncharacterized protein LOC109011023 isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
jre  Juglans regia (English walnut)
Pathway
jre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109011023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:jre03036]
    109011023
   03400 DNA repair and recombination proteins [BR:jre03400]
    109011023
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    109011023
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     109011023
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 109011023
NCBI-ProteinID: XP_018847577
UniProt: A0A2I4GUK8
LinkDB
Position
6:18932014..18937561
AA seq 909 aa
MAETEEDASFWRESPPGGDGASMSLGMKKRKRKSLKREKREFLHPTTTKETPTAVSSFIL
SGSASSTTPLQSRTHNPNLNLTHDYGISSYAHYQQQPQIEASSHCDSFDNPHVNLSSDFY
NNTKDNHMEENNMKKKRKRKTSSSKKGVEEVEESRYHLFQEELSYDPPTNQNVRNEIEEE
SNSKNSINGCANRWVGIDLQSPTNPLCKDIDLSTEGNIFTSSTGDSVVAENFRDDDRLKH
VRKKKKNKNNRGERDDKTSSKLIKSEEIPPSLQKFEDVLSRYIYKGNGGTNSLKKVRHND
EEEEKSSKEPTSQCKMTKDSSILATERGRNFAGQIDSDAVVVPTIYTNLNEEVQRNGPGI
GEAVYCKRRRVKGKQQTIAHLEIQNASPYFQRSTGRVLTNDGKTTKMKSTRPRSKISAAF
VKVSRYFQKMPEKQEGSVLVCDKQKKEPSRQNGLGIGDIDHSKRRRVIGKQQTIAHTKVR
KASPYFQRSTGQQVLRNDGNDTQMKSTGPRSKTSATSVKVSRFFQKMPEKEEGSDLVCDR
LKKESSRQIKSGVHPSVGNQILKLEDVLSQCIYKSNGISKKVKNGQHKGEEEKKYSEEPT
FSSNMTNPSSIIAIDGGRNSAEHVDGEAVVAPRIYTNLKEEEMQQNGLGIEKVDSCKRRR
GKEKQQTIAHPEVQKLSPYFQSSTGQQVLRNGSNDTQIKSRRPCAKPSATSVKVTSRFFK
KMPGEEENADGILLGGKKTRKRSVKVKTVLSTLQKRFDAYRRKSPDNMWKPPRSRYGLLQ
EDHADDPWKVLVICMLLNRTTGSQAGKILLDLFTLCPDAKTATEVPAKEIEKIIQPLGLQ
KKRAQMIQRFSQDYMGDTWKYVTDLYGVGKYAADAYAIFCTGKWDRVRPTDYMLNYYWEY
LFSIRATLL
NT seq 2730 nt   +upstreamnt  +downstreamnt
atggcggagacagaggaagatgcgtcgttttggagggagagcccgccaggcggagatgga
gcgagcatgagtctgggcatgaagaaacggaagaggaagagtttgaagagggaaaagcga
gaatttcttcatccaactacgacgaaagaaaccccaaccgccgtaagttctttcatactc
tcgggctctgcttcgtctaccacgccccttcaatcacgtacacacaatcccaatctcaat
ctcacccatgattatggtatttcttcctatgcccattaccagcaacagcctcaaatcgaa
gcttcctcacattgtgattcttttgataaccctcatgttaatctatccagtgatttctac
aataataccaaagataatcatatggaggagaacaatatgaagaagaagaggaagagaaaa
actagttctagtaagaagggtgtagaagaagtagaagagtcgcggtatcatctcttccaa
gaggaactgtcatatgatcctccaactaatcaaaatgtgcgaaatgagattgaagaagaa
agtaatagcaagaatagcataaatggatgcgccaatagatgggtcggcattgacctacaa
tctccgactaacccactatgcaaggatattgatttatctactgaaggcaacatatttaca
tcgagtactggagattcagttgtagcagagaattttagagatgatgaccggctgaagcac
gtgaggaagaagaagaagaataaaaacaataggggggaaagggatgataaaactagcagc
aagcttatcaagtcagaggagattccaccgagtttgcagaaatttgaggatgtcctttcg
cgatatatttacaagggtaatggaggtactaacagcttaaagaaagtccgtcacaatgat
gaggaggaggagaaatcttccaaggaacccacttcccaatgtaagatgaccaaagattcc
tccattctagctaccgaacgtggcaggaacttcgctgggcagattgacagtgatgctgtt
gtagtgccaacaatttacacaaacttgaacgaagaagtgcagcgaaatgggccaggaatt
ggtgaggctgtttattgcaagcgaaggagagttaaaggaaaacagcaaacaattgctcac
cttgaaattcaaaatgcctccccatatttccagaggtcaacaggacgagtgttgacaaat
gatggtaaaactacaaaaatgaaatcaacaagacctcgttcaaaaatttctgctgctttt
gtgaaggtctcccgctacttccaaaagatgcccgaaaaacaggaaggtagtgttttggtt
tgcgataagcagaaaaaagaaccgagtcgccaaaatgggctagggattggggatattgat
cattccaaacgaaggagagtaatcggaaaacagcaaacaattgctcacactaaagttcga
aaggcctccccatatttccagaggtcaacaggacaacaagtgttgagaaatgatggtaat
gatacacaaatgaaatcaacaggacctcgttcaaaaacttctgcaacatcagtgaaggtc
tcccgcttcttccaaaagatgcccgaaaaagaggaaggtagtgatttggtttgcgatagg
ctgaaaaaagaatcgagtcgccaaataaagagtggggttcatccatctgttggaaatcag
attttgaagcttgaggatgtcctttcgcaatgtatttacaagagtaatggcatatccaag
aaagtaaagaatggccagcacaaaggtgaggaggaaaagaaatatagtgaggagcccacg
ttctcatctaatatgactaatccctcctccattatagcaattgatggtggcaggaactca
gctgaacatgttgacggtgaagctgttgtagcaccaagaatttacacaaacttgaaagaa
gaagaaatgcagcaaaatgggctaggaattgaaaaggttgatagttgcaagcgaaggaga
ggaaaggaaaaacagcaaacaattgctcaccctgaagttcaaaagctctccccatacttc
cagagttcaacaggacaacaagtgctgagaaatggcagtaatgatacacaaatcaaatca
agaagaccttgtgcaaaaccttctgctacttcagtgaaggtcacttcccgcttcttcaaa
aagatgcctggagaagaagaaaatgcagatggcattttgttgggaggtaaaaagactcgt
aaacgaagtgtgaaagttaaaacagttttatctactttacagaaaagatttgatgcttac
cgaagaaaaagtccagataacatgtggaagcctccacgctccagatatggtcttctccaa
gaggatcatgccgatgacccttggaaggtattggtgatatgcatgctcctaaatcggaca
actggttcgcaggctggaaagattctattggatctctttacactttgtcctgatgcaaag
acagctactgaagtccctgcaaaggagatagaaaagattatacaacctctaggtctacaa
aaaaagagggcacagatgatacagcgcttctctcaggactacatgggagatacctggaaa
tacgtgaccgatctgtatggtgttggcaaatatgcagctgatgcgtatgcaatattttgt
actggaaagtgggaccgggtgagacctactgattacatgctaaattattactgggaatat
ctcttcagtattagagctacattattatga

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