Juglans regia (English walnut): 109011083
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Entry
109011083 CDS
T05245
Name
(RefSeq) uncharacterized protein LOC109011083
KO
K14315
nucleoporin NDC1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109011083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109011083
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109011083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
YrhC
Motif
Other DBs
NCBI-GeneID:
109011083
NCBI-ProteinID:
XP_018847689
UniProt:
A0A834D5A4
A0A2I4GUW1
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All DBs
Position
3:complement(11145619..11154632)
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AA seq
549 aa
AA seq
DB search
MSTIPPEMVVKNRFLGFLIWQSIPSSAIFLLFKTFISTITTSTSTSSSSSSSRSRNLFLS
CVPSLITLFTFFTFHLSQLLFSASLSLVSSPHPHRPAHPFELMLGLIRFLLVSGSSASVS
ADFRSRAKVSLSFVLFVAACAVSGCLAMVSMCWVKSNEFYVEWLIRGLGIGLLYGLVYIY
NRRWVLEFPIIQRPPFFSFKMGLPSATTSALKLSGVAYLFLAVLGAILPDEFKSLATVRK
FIAEQIIFFIGSFVLILCWELSHHLHRVLHTKRFMFAPPKGSAAAETNPSEDLLAALEES
NPSSLLRYLAYLDLCMVCENNVDTWRRAAFFEETGETYKRVTAVCLRPLEELALKLAEGL
ESNVEKTSQLSNQLLALSDSRLESKYSKPLNNFQLYAWCARTVGSLTARSHGEDRFGVAQ
LSGSNAAVISTLLSCLLAVEALMGKKTNIQSASHLMGPAGIKWATLSTGRVEVAGAKKRG
GPLYLKAYAISDVLRTSIYHVVSAFHDEMLKSAKLGLLEKDWIISGKPLFGSRELLLHKL
RLFLDFRAN
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaataccacctgaaatggttgtaaagaaccggtttctagggttcctcatatgg
cagtccattccctcctccgccatcttccttctcttcaaaaccttcatctccaccatcacc
actagtacttctaccagcagcagtagtagcagtagcagaagcagaaacctattcctctct
tgtgtcccatcgcttattaccctcttcaccttcttcactttccacctctctcagctccta
ttctctgcctctctctcgctcgtctcatctccccacccccaccgcccagcacaccctttt
gagctcatgctcggtctcatccgcttccttctcgtctcgggctcatctgcatcggtgtcc
gctgattttcgcagccgggcaaaggtttctctgagctttgtgttgtttgtggcggcgtgt
gctgtatcgggatgtctggcgatggtgtcgatgtgctgggtgaaatccaacgaattttat
gtggagtggctgattcggggacttgggattggtttgctttacgggttggtttacatttat
aaccgcagatgggttctggagtttcccattattcagcgtccacctttcttcagcttcaag
atggggctcccttcagctaccacaagtgctctgaagctttctggtgtggcttatctattt
ttagctgttttaggagcaattcttcctgatgagtttaagagcctggccacagtaagaaag
ttcattgctgagcagattatctttttcattgggagttttgtgttgatcctctgctgggaa
ttaagtcaccatttacatcgggtgctacataccaagaggttcatgtttgcacctcccaaa
ggatcagcagctgccgaaacaaatccgagtgaggacctccttgcagctttggaggagagc
aacccaagttctcttcttcggtatcttgcctatcttgatctctgcatggtttgtgagaat
aatgttgatacatggagacgagctgccttttttgaagaaactggcgagacttacaaacga
gtcacagctgtatgcttgaggccactggaagaacttgcattaaagttggctgaaggcttg
gagagtaatgttgaaaaaacctcccaactatccaatcagttactcgcactaagtgattca
cgtctagaatcaaagtacagcaaaccattgaacaactttcagctatatgcatggtgtgcc
aggacggttggctcgctaactgcacgctcgcacggggaggacaggtttggggttgctcag
ctctctggtagtaatgctgctgttatctcaactttgttatcttgccttcttgctgttgag
gcattaatggggaagaagaccaacattcaaagcgcctctcatttgatggggccagctgga
attaaatgggcaacattaagcactggaagagtagaagttgcaggagctaaaaagagaggt
gggcctttatatttgaaagcatatgccatttctgatgttttaaggacctcaatctaccat
gttgtgtctgctttccacgatgagatgctgaagagcgctaagttgggtcttcttgagaaa
gattggatcatcagcggcaagcctctttttggctcccgtgagctcctgctgcataaactc
cgtcttttcctggatttccgagcgaactaa
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