Juglans regia (English walnut): 109011380
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Entry
109011380 CDS
T05245
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
109011380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
jre03011
]
109011380
Ribosome [BR:
jre03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
109011380
Bacteria
109011380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Motif
Other DBs
NCBI-GeneID:
109011380
NCBI-ProteinID:
XP_018848096
UniProt:
A0A2I4GW16
LinkDB
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Position
6:complement(1489279..1495243)
Genome browser
AA seq
531 aa
AA seq
DB search
MTILLQPCKSLSSPNYSLPVNSFTAVCNTVQNKAYPSIPKWPALKPSKFHSFSTLGPLQN
LGFTNHSPSRRGTRVAFCSRNEVFDGFSSTQVPQKPESKDGKGNEELELLNKPSPIPIDN
GVSSELDKECEKPGKEEALEPFLKFFKGRDDEAEVKEEAGVLEEKFDVDDKYEEANKVGV
EYYEPKPGDFVVGVVVSGNENKLDLNVGADLLGTMLTKEVLPLYDKEMEYLLCDMDRDAN
EFMVRGKMGIVKNNEALGRGSAPGRPVVETGTVLFAEVLGRTLSGRPLLSTRRFFRRISW
HRVRQIKQLNEPIEVKITEWNTGGLLTRIEGLRAFLPKAELLNRVNNFSELKENVGRQIY
VQITRIDETKNDLILSEREAWEKLYLSEGTLLEGTVKKIFPYGAQIRIGETNRSGLLHIS
NITRGRITSVSDLLAVDEKVKVLVAKSMFPDKISLSIADLESEPGLFVSNKEKVFAEAAV
MAKKYREKLPAGLAPYKSELSPTNALPFDNEASMYANWKWFKFEREDNPAP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgacaattctacttcaaccttgtaagtccctttcttccccgaactatagtttaccggta
aacagtttcacggctgtatgcaacactgtccaaaacaaagcatatccaagcataccgaaa
tggccagctctaaaaccatccaaatttcactccttttccactttagggccccttcaaaat
ctgggatttactaatcattctccaagccggagaggtacccgtgttgctttttgttctagg
aatgaggtttttgatggtttttcaagtacccaggtaccccaaaagcccgagagtaaagat
ggtaaagggaatgaagagcttgaattgctaaataagccttccccaatacctatagataat
ggggtttcctctgaattagacaaggaatgtgaaaaacctggtaaagaggaggccttagag
ccttttttgaagtttttcaagggaagagatgatgaggctgaagtgaaagaagaggcaggt
gtgttagaggagaaatttgatgtggatgataaatatgaggaggctaataaggtcggggtt
gagtactatgagcccaaacccggtgattttgttgtgggggtggtagtttctggtaatgag
aataagcttgatttgaatgtgggagcagacttgctgggtacaatgttgacaaaggaggtg
ctccccttgtatgacaaggagatggaatacttgttatgtgatatggatagggatgccaat
gagtttatggttcgcgggaagatgggcattgtgaagaataatgaagcattgggcagggga
tcagcgccgggaagacctgttgtggagactggaactgttttatttgcagaggttcttggg
agaactcttagtggtaggccattgctttcaactagacgattcttccggcggatttcttgg
caccgagtgaggcagataaaacaactcaatgaacctatcgaggtgaaaataacagagtgg
aatacggggggccttcttacaagaattgagggattacgagcttttcttcccaaagctgag
ttattgaatagagttaacaacttctctgagttgaaagaaaatgttggacggcagatatat
gtgcagattactcgtatagatgagactaaaaatgacctaatattgagtgagagggaagct
tgggaaaaattataccttagtgagggaacgcttttagaaggaactgttaaaaaaatcttc
ccgtatggagctcaaataaggataggcgaaactaacagaagtgggttactgcatatttca
aacatcacccgtggtcgaattacttctgtcagcgacttacttgcagttgatgagaaggtt
aaagttcttgttgcaaagtcgatgtttcctgacaaaatatctctaagtattgctgacctt
gaaagtgagcccgggctttttgtatcaaacaaggagaaagtatttgctgaagctgcagtg
atggcaaagaagtatagggaaaagctacctgccggtttagccccttataagtcagaactt
tctccaaccaatgctttaccatttgacaatgaagcaagtatgtatgcaaattggaagtgg
ttcaagtttgaaagagaagataatccagctccttaa
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