Juglans regia (English walnut): 109011401
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Entry
109011401 CDS
T05245
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
109011401
Spliceosome [BR:
jre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109011401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
TGF_beta
P_C10
Motif
Other DBs
NCBI-GeneID:
109011401
NCBI-ProteinID:
XP_018848136
UniProt:
A0A2I4GW56
A0A833XKG0
LinkDB
All DBs
Position
6:complement(1715396..1723706)
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AA seq
443 aa
AA seq
DB search
MTDPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDIPTAVNALQF
YANVQPSIRGRNVYVQFSSHQELTTMDQNTQGRGDEPNRILLVTIHHMLYPITVDVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQSRQNAVVARTALQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPNLPTEQKGRSSQPGYGEAGGTYGLQATGRGVAFPQMANAEAIAAA
FGGGLPPGISGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALIQM
GDGFQAELAVHFLKGALIFGKQLEVNFSKHPNITQGAETHEYINSNLNRFNRNAAKNYRY
CCSPTKMIHLSTLPLEITEEEIVSHLEEHGTILNTKLFEMNGKKQALVMFETEEQATEAL
VCKHATSLAGSIIRISFSQLQSI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacagacccttctaaggtcattcacgttcgcaatgtgggccatgagatatctgaaaat
gatttgcttcagctattccagccatttggagtcattactaagcttgtgatgcttcgtgca
aaaaatcaggctctgatccaaatgcaagatattcctaccgcagtcaatgctctgcaattc
tatgcaaatgttcagccaagcataagggggaggaatgtttatgtccaattctcatcacat
caggaactaacaacaatggatcaaaatactcaaggaagaggagatgagccaaatcgaatt
ctcctagttactattcatcacatgctatatccaataacggtggacgtgctgcatcaagtg
ttttctcctcatggatttgtagagaagatcgtaacttttcaaaagtcagctggttttcaa
gcacttattcagtatcaatcacgccagaatgctgttgttgctagaactgcacttcaggga
cgtaatatttatgacggttgctgtcaactggacattcagttctcaaaccttgacgagttg
caagtaaactacaataatgagcgttctagggatttcacgaacccaaatctgcccacagaa
cagaaaggcagatcttcacaaccagggtatggcgaggcagggggcacgtatggccttcaa
gctactggacggggagttgcatttccacagatggccaatgcagaagcaattgcagctgcc
tttggaggaggtctgcctcctggaataagtgggacaaatgacaggtgtacagtccttgtc
tccaatctaaatcctgatagaatagatgaggataagctcttcaaccttttctccatatac
ggaaacattgtgagaattaaacttctccgcaacaaaccagatcatgcgcttattcagatg
ggggatggtttccaggccgaactggcagtacactttttgaagggagcactgatatttggg
aagcagttagaggtcaacttctcaaagcatccaaacataacccaaggtgctgagacacac
gagtacataaactcaaatctcaaccgcttcaaccgtaatgctgctaagaattaccgctac
tgctgctcccctacaaaaatgatccacctgtcaacacttcccctggaaatcactgaagag
gagattgtgagccacttggaagaacatggcaccattctcaacactaagctttttgagatg
aatgggaagaagcaggccctagttatgtttgaaactgaggagcaggctactgaagcccta
gtgtgcaagcatgctacttcgcttgctggatcaataatccggatttctttttcccagtta
cagtctatttaa
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