Juglans regia (English walnut): 109011460 Help Entry 109011460         CDS       T05245                                  Name (RefSeq) protein PAT1 homolog isoform X1   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism jre  Juglans regia (English walnut) Pathway jre03018   RNA degradation Brite KEGG Orthology (KO) [BR:jre00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     109011460  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:jre03019]     109011460 Messenger RNA biogenesis [BR:jre03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      109011460   mRNA degradation factors    5'-3' decay     Decapping complex      109011460 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  109011460 NCBI-ProteinID:  XP_018848220 UniProt:  A0A2I4GWE5 LinkDB All DBs Position 9:2552325..2565847 Genome browser AA seq 827 aa AA seqDB search MDGFCIGGSLEEPSNPKDREQFGDNSTEDTVFDASQYAFFGKDVVEEVELGGLEEEEVGL PTVGIDEEEFLYNREEGENLQSLSDIDDLASTFSKLNKVVSGSRSTGIIGDRESREGSSA AEWAQGEDFPYWLDPHVLDSESTQDGKRWSSQPSNFLAESKPLYRTSSYPEQQQQQHHQN HHLQHVSSEPIPVPKSSFTSYPPPGGRSPQGSPNHHPGHLNVPYLAGRSEMGISSPTLSP FSNSQPQLTGLQHGLNFGGNMPQFSQSLSGNSRPPNHWVTQSNFYHGDPSGLVNNLLPQR LPHQNGLMPPQIVPQPQPPQHRLHHPVQPSFGHLSGFQSQLYNPHLSPGPPLMGKFEAML GLSDLMRDQRLKSAQKGRVNLRFPHQGFDTSSHRSDSGWPQFRSKYMTSDEIEGILRMQL AATHSNDPYVDDYYHQACLAKKSAGAKLKHHFCPTQVRDLPPQARANSEPHAFLQVDALG RVSFSSIRRPRPLLEVDPPNMSIVGSSEQKVLEKPLEQEPMLAARVMIEDGLCLLLDVDD IDRFLQFNQLQDGGAQLRRRRQVLLEGLAASLQLVDPLGKNGNTVGLAHKDDLVFLRLVS LPKGRKLLARYLQLLFPAGELMRIVCMAIFRHLRFLFGGLPSDPAAAETTDNLAKVVSVC VHGMDLSAISACLAAVVCSLEQPPLRPLGSSAGGGASLILKSVLERATELLTDPHAASSY NITNRSLWQASFDEFFGLLTKYCVNKYDSVMQSLILQAPSNTSPIGSDAARAISKEMPVE LLRASLPHTDENQKKLLMDFAQRSMPVVGLNGNGGSSGHMNSESVLG NT seq 2484 nt NT seq  +upstreamnt  +downstreamnt atggatgggttttgtattggtggaagtcttgaagagccttccaatcctaaagatcgtgag caattcggagataattccacagaagacacagtatttgatgcatcacaatatgcgttcttt ggtaaagatgttgttgaggaagttgagttggggggattagaagaggaggaggtcggtttg cctacagttgggatagacgaggaagaatttctgtacaatagagaagagggtgagaattta caatctctgtctgatattgacgatcttgccagtactttctcaaagttgaacaaggttgtt agtggatcaagaagcacaggtatcattggtgatagggaatccagagaaggttcctctgct gccgaatgggcacaaggggaggacttcccttactggttggatccacacgtattggactct gaaagcactcaggatggcaaacgatggtcatcacagccaagcaattttcttgctgaatca aagcctttgtacagaacgtcttcataccctgagcagcaacaacagcagcatcaccaaaac catcacctccagcatgtctccagcgagccaattccagtaccaaaatcttcttttacttca tatcctccccctgggggcaggtctccacagggttcacccaaccaccacccaggccatctg aatgtcccatatcttgctggtagatctgagatgggaatatcttcaccaactctctctccc ttctctaattctcagccacagttgactggtttacaacacggtttgaattttggaggaaat atgcctcaatttagtcagagtctctcaggtaatagccgaccaccaaaccactgggttacc cagtccaacttttatcatggagatccttccggccttgtgaacaacttgctgccacaacgg ttaccccatcagaatggattaatgccgccacaaatagtgccacagccacagccgccacag cataggctgcatcatcctgttcagccatcattcggccatttatcggggtttcagtcacag ctatataaccctcatctttctccaggtcctcccttaatgggcaagtttgaagcaatgctt ggcctttctgatctaatgagagaccaaagattgaaatcagctcagaaagggagagtgaat ctcaggtttccccatcagggctttgataccagtagccacaggagcgatagtgggtggccg cagtttcgatcgaagtatatgacatctgatgaaatagagggtatccttagaatgcagctt gctgcgacgcacagtaatgacccctatgtagatgactattaccaccaggcttgtcttgca aaaaaatctgccggggcgaagctgaaacatcatttctgcccaactcaagtgagggatctt cctcctcaagctcgtgctaattccgaaccacatgcttttctccaagttgatgctcttggg agggtttcgttttcatcaattcgtcgacctcgtccactccttgaagttgaccctccgaat atgtccattgttggcagctctgaacaaaaagttttggagaagccccttgaacaagagcca atgcttgcagcccgggtcatgatcgaggatggcctatgtcttcttcttgatgtggatgat attgaccgtttcttacagttcaatcagctccaagatggtggggcccagttaagacggagg cggcaagtcctgctggaagggctggcagcatcacttcaattggttgacccacttggcaaa aatggaaacacagttggccttgctcacaaggatgatcttgttttcttacggttggtttct cttcccaaggggcggaagctccttgcacggtatctacagcttctttttcctgcaggcgag ctcatgcgaatagtctgcatggcaatattccgtcatttaaggttcttatttggtggcctt ccctctgatccagcagcagcagaaacaacagataatcttgctaaggttgtttccgtgtgt gtccatggcatggatcttagtgcaatcagtgcctgtctggcagcagtagtttgttcctta gagcagcccccacttcgtcctcttggaagctcggctggaggtggggcttccctgattctt aaatctgttcttgagagggcaactgaactcttaaccgatcctcatgctgctagcagctac aatataactaatcggtcactttggcaggcctcatttgatgagttctttggccttctcacc aagtactgcgtaaataaatatgatagtgttatgcagtcattgattttgcaagctccatca aatacgtctcctattgggtcagatgcagctagagctatcagtaaggaaatgccagttgag ctgttacgagcaagtcttcctcacaccgatgagaaccaaaagaagctgttaatggatttt gcacagcgttcaatgcctgtagttggattaaacggtaatggtgggagttctggtcacatg aattcggagtcggtgctgggttga

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