Juglans regia (English walnut): 109011463
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Entry
109011463 CDS
T05245
Name
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
jre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109011463
03015 mRNA surveillance pathway
109011463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109011463
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109011463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
109011463
NCBI-ProteinID:
XP_018848227
UniProt:
A0A2I4GWF8
A0A833UWE4
LinkDB
All DBs
Position
9:2649665..2669045
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AA seq
417 aa
AA seq
DB search
MAKPSRGRRSPPSGSVSGSSSRSRSYTGSDSRSSSRSRSGSLSRSRSRSRTFSSSSSPSR
SVSSRSASPPPSKKSPMEVARRGRSPPPNSKRTSPPPRKASPMQESLVLHIDKLSRNVNE
GHLKEIFSNYGEVVNVELAMDRVVNLPKGYGYVEFKTRVDAEKAQLYMDGAQIDGNVVQA
RFTLPPRQKVSPPLKATANAPRRDAPKTDGIAADVEKDGPKRQREPSPRRKPPASPRRRS
PITRRGGSPRRQPDSPPRRRADSPIRRRVESPYRRGDTPPRRRPTSPGRGRSPSPLRRNR
SPARRMRGSPVRRRSPLPPRRRTPPRRARSPPRRSPIGHRRSRSPIRRPARSRSRSVSPR
SRGRAPVTRRGRSSSYSKSPSPRKVTKRSSRSPRRPLRGRSSSNSSRSSSPLPPRKP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccaagccgaggccgtcggtcgccgccatctgggtccgtttcgggctcctcc
tctcggtcaaggtcctacaccggctccgactcccgttccagctctcggtcccggtccggg
tccctctcacgttccagatctcgatcgaggacgttctcctcatcttcttctccgtctcgt
agtgtcagttctcgcagcgcaagccccccgccttcgaagaagagtcctatggaagtagct
aggcgaggtcgttctccacctccaaattctaagagaacttctccaccaccaaggaaagct
tctcctatgcaagaatcgcttgtccttcacatagacaaacttagccggaatgtgaatgaa
ggtcatttgaaagaaatattcagtaactatggtgaagttgtaaatgtggagctggcaatg
gatcgcgttgtcaaccttcctaagggctatggatatgtggagttcaagacaagagtggat
gctgaaaaagcacaattatacatggatggtgcccaaattgatgggaatgttgttcaagca
aggttcactttacctccacgacagaaggtgtcaccccccctaaaagctactgccaatgct
ccaaggagagatgctcccaaaactgatggaattgctgctgatgtcgagaaggatggaccc
aagcggcagagagaaccttctccccgtcggaagcctcctgcctcaccacgaaggagatct
cctattactcgaaggggaggatcccctagacgtcagccagattctcctccacgccgtcgt
gcagattctcctatccgtcgtcgagtggaatctccttatcgccgtggtgatacacctcca
aggagaaggcccacatctcctggcagaggtcgttccccatctccattaaggcgcaacaga
tcccctgcaagaaggatgcgtggcagtcctgttcgcagacgttctccacttcctccaagg
cgccgtacacctccaagacgagctcgtagtcctcctagaaggtctcctattggtcataga
cgtagtcgctctcccattcgcagacctgctcgctcacgttcgcgatcagtctctccaagg
agcagaggacgtgcaccagtcacaagacgtgggaggtcgtcatcctactctaaatcacct
agtccacgcaaggttaccaagagatcgagtcgtagtccaagaaggcctttgagaggaagg
agcagtagcaacagcagccgcagtagttcaccactgccacctcgtaagccatag
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