Juglans regia (English walnut): 109011590
Help
Entry
109011590 CDS
T05245
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1 isoform X1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109011590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jre03009
]
109011590
Enzymes [BR:
jre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
109011590
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
90S particles
Other 90S particles
109011590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
109011590
NCBI-ProteinID:
XP_035544167
UniProt:
A0A6P9ENK9
LinkDB
All DBs
Position
3:complement(4226049..4228991)
Genome browser
AA seq
286 aa
AA seq
DB search
MVRSYAVKGKKRKKREEVYDREEEQEEQVAEQPVQDAKRDVIEKTSNSAEEAEEGKEKEV
VNELQGIPITPSHQNADKAGVIFILEKASLEVAKVGKSYQLLNSDDHSNFLRKNNRNPAD
YRPDIVHQALLMILDSRINKSGRLRAVYVRTEKGVLIEVKPYVRIPRTFKRFAGIMLQLL
QKLSITAVGKREKLLRVIKNPVTQYLPINSRRIGLSHSSDKLVNINQYVASAVSDADIVF
VVGAMAHGKIDKEYANDFISISGFPLSAAYCIAMITTALEAKYNIL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtacggtcctatgcggtgaaggggaagaagcggaagaagagggaagaggtatatgac
agagaagaagaacaagaagaacaagtagcagaacagccagtgcaagatgcaaagagagat
gtgatagagaaaacaagtaatagtgcggaagaagcagaagaaggaaaagaaaaggaggta
gtgaatgaacttcagggtattccgattaccccaagccaccagaatgccgacaaagccggt
gtcatcttcattcttgaaaaggcttctttagaagttgcaaaagttgggaagagttatcag
cttttgaactcggacgaccattccaatttcttacgaaaaaataacagaaatcctgctgat
tacaggcctgacattgttcatcaggctctgctaatgattttggatagccggattaataag
agtggaaggttgcgagctgtgtatgtgagaactgagaaaggtgtccttattgaagttaaa
ccctatgttcgtattccaaggacatttaagcggttcgctggtatcatgttgcagctgcta
caaaagctgagtattactgctgttggtaagcgtgagaaacttctacgtgtgatcaagaac
cctgtaacccagtatctacccatcaactctcgcagaataggactatcacatagttcagat
aaattggttaatataaaccaatatgtggcttctgctgttagtgacgctgacattgtgttt
gtggttggtgcaatggcccatgggaaaattgataaggagtatgcaaatgattttatatca
atttctggtttccctctgagtgctgcctactgtattgcgatgattacaactgctctggag
gcaaagtataatatcttgtga
DBGET
integrated database retrieval system
