Juglans regia (English walnut): 109011788
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Entry
109011788 CDS
T05245
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
109011788
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
109011788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
R3H-assoc
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
109011788
NCBI-ProteinID:
XP_018848658
UniProt:
A0A2I4GXP3
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All DBs
Position
5:17569227..17587526
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AA seq
1045 aa
AA seq
DB search
MIAEKPSWIRHEGMQIFSIDVQPGGLRFATGGGDHKVRIWNMKSVSRDLGNDESTHRLLA
TLRDHFGSVNCVRWAKHGRFVASGSDDQVILIHERKPGSGTTEFGSGEPPDVENWKVAMT
LRGHTADVVDLNWSPDDSTLATGSLDNTIHIWNMSSGICTAVLRGHSSLVKGVAWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVIVVKFNHSMFRRNSTNAQEVKSAPVGWSNGASKTGG
KEPQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFAQSVVDLSWSPDGYSLFACSLDGS
VATFHFEVKELGHRLSDTELDELKKNRYGDVRGRQANLAESPAQLLLEAASSKQNPRKKV
ANIHQKQTLIKSSLDAGVATKSEPQADEGKKTSGTASDGLNKVTSGRISSPVKQREYRRP
DGRKRIIPEAVGLPIQQENISGGAQAQALDFPLMSSDHGKDDNGVVHTGVGFKESSVRGT
VGRSSDVKERSGVTARASIAESLIIEKVPISTARDGSINVEESGAAKASTSLPGSSNSLS
IRVFDKKEGEDALPICLEARPKEHAANDIVVVGNTLMMRETEIVCTRGSETLWCDRIAGK
VTVLVGNANFWAVGCEDGCIQVYTKCGRRAMPTMMMGSAATFIDCDECWKLLLVTRKGLL
YVWDLYNRNCLLHDSLASLVALNPNASSKDAGTIKVISAKLSRSGSPLVVLATRHAFLFD
MSLMCWLRIVDDCFPASNFASSWNLGSVQSGELAALQVDVRKYMARKPGWSRMTDDGVQT
RAHLEAQLESALALKSPHEYRQCLLSYIRILAREADESRLREVCESYLGPPTGMAEAAFS
DSKNPAWDPFVLGMRKHKLLREDILPAMASNRKVQRLLNEFMDLLSEYESAETNFDQKNP
APPTSSPMATDQGDSAVPAAADQMDSAPTMTDHMDSGPAAIDQQDSTEPKKDQANSAPPV
IDQVNSDSPVTDQVNLPSQAKDSGS
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgagaaacctagttggattaggcatgaggggatgcagattttctccattgat
gttcaacccgggggtcttaggttcgctactggtgggggcgaccacaaggtccgtatatgg
aacatgaaatctgttagcagggacttgggaaatgatgaatctacgcataggcttcttgca
accctccgtgatcactttggttctgtcaactgtgtcaggtgggctaaacacggtaggttt
gttgcatcaggctctgatgatcaggtgattttaattcatgagaggaagcctggttcagga
accactgagtttggcagtggagagcccccggatgttgagaactggaaggttgcaatgact
ttgagaggacacactgcagatgtggtggatcttaattggtcaccagatgactcgaccctg
gcaactgggagtttggacaatactatccatatttggaatatgagcagtggcatttgcact
gctgttcttaggggtcattctagcctggtcaaaggagttgcttgggatcccattggctca
ttcatagctagtcagtcagatgataagactgtcattatttggcgaacaagtgattggagc
cttgctcacaggacggatggtcactgggctaagtcgcttggatctacgtttttcaggcgg
cttggatggtccccttgtggccattttattactaccactcatggtttccagaagccaagg
cattctgcacctgttctagagagaggggaatggtctgccacgtttgacttcttaggacat
aatgccccagttattgtggtgaagtttaatcattccatgttcagaaggaattccaccaat
gctcaggaagtgaaatctgcacctgttgggtggagtaatggggcttcaaagactggaggc
aaagaaccgcaaccatataatgttattgcaattgggagtcaggaccgtactataactgta
tggacaactgcaagtcctcgtcctctctttgtggccaagcatttctttgctcagagtgtt
gtcgatttatcttggagtcctgatggatattcactgtttgcctgctctttggatgggtcg
gtggctactttccattttgaggtgaaagaacttggtcacagactaagtgatactgaactg
gatgagttaaaaaagaatcgttatggtgacgtgagaggtcgacaagcaaacttagcagaa
agcccagcgcagttattgcttgaagcagcttcatctaaacaaaacccaaggaaaaaagtt
gctaatattcatcaaaagcagaccctcataaaatcttcacttgatgcgggggttgcaaca
aagagtgagcctcaagctgatgaggggaagaagactagtggaacggctagtgatggttta
aataaagtgacttctggccgaatttctagtcctgtaaaacaaagagaatataggcgccct
gatggccgaaagaggatcattcctgaagcagttggtctgcctattcagcaggagaatatc
tctggtggggctcaggcccaggcactcgactttcctcttatgtcatctgatcatggaaag
gatgataatggtgtggtacacactggggtgggctttaaagaaagttctgtcaggggaaca
gtaggcagaagctcggatgtaaaggaacgttctggggtcactgctagggcttcaattgct
gagagcctaattattgagaaagttccaatctccacagccagagatggaagcatcaatgtg
gaggagtcgggggctgccaaggcttctacttctttgcctggttctagtaattctctttct
atcagggtgtttgataagaaagaaggagaagatgcattaccaatttgcttggaagctcgg
cctaaagaacatgctgcaaatgatattgttgtggtgggcaatacattaatgatgagagaa
acagaaattgtatgcacaagggggtctgaaacactttggtgtgataggattgcagggaaa
gtcactgttttggttggaaatgcaaacttctgggcagttggatgtgaagatggatgcata
caagtttacacaaagtgtggaaggcgagctatgccgaccatgatgatgggatcagcagca
acatttatagattgtgatgagtgctggaagttgttgctagtcacaaggaaaggattgttg
tatgtttgggatctatacaaccggaactgtctccttcatgactcactggcatctcttgtt
gccttgaacccaaacgcatcatcaaaagatgcaggcacaatcaaagttatatctgcaaag
ctatcaagatctggttctcctctggtggttctggccactcgccatgccttcctctttgat
atgagtctcatgtgttggctaaggattgtagatgattgcttccccgcttcaaactttgct
agctcctggaatttgggttcagttcagagtggcgagctggctgcattgcaggttgatgtt
aggaagtatatggcaagaaagcctggttggagcagaatgactgatgatggagtgcagaca
cgtgctcatttggaagcacagttggaatccgctttggctttgaagtcccctcatgaatat
cgccagtgcctcctgtcatacatacgcattcttgcgagagaagcagatgagtctcgttta
agagaggtctgtgagagttatcttggacctccgactgggatggctgaagctgcattttca
gattcaaagaacccggcatgggatccttttgtgcttggaatgagaaaacacaaactttta
agggaagatattcttccagcaatggcatcaaacagaaaagtccagagattgcttaatgag
tttatggatctcctatccgaatatgagagtgccgaaactaattttgaccaaaaaaatccc
gctccaccaacatcatctccgatggcgactgaccaaggggactctgctgtaccagcagca
gcagatcaaatggactccgctcccacaatgacggaccatatggattctggccctgcagct
attgatcaacaggactcgactgagccgaaaaaagatcaagcaaactctgctccaccagta
atagatcaagttaattcagattcgccagtgacagatcaagttaatctgccctcacaagct
aaagattcgggttcttga
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