Juglans regia (English walnut): 109011914 Help Entry 109011914         CDS       T05245                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism jre  Juglans regia (English walnut) Pathway jre03040   Spliceosome Brite KEGG Orthology (KO) [BR:jre00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     109011914  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:jre03021]     109011914    03041 Spliceosome [BR:jre03041]     109011914    03036 Chromosome and associated proteins [BR:jre03036]     109011914 Transcription machinery [BR:jre03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      109011914 Spliceosome [BR:jre03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     109011914  Complex B     109011914  Complex C    U2 SnRNP specific factors     109011914 Chromosome and associated proteins [BR:jre03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      109011914     TFTC complex      109011914 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A Motif Other DBs NCBI-GeneID:  109011914 NCBI-ProteinID:  XP_018848848 UniProt:  A0A2I4GY80 A0A833Y069 LinkDB All DBs Position 3:2312285..2324979 Genome browser AA seq 1381 aa AA seqDB search MAVSEEECSSAKSRSSSPASSSSTHYLAKCVLKGSVVLQVLYGHIRSPTYLDVVFGKETS IELVIIGEDGIVQSVCEQPVFGTIKDIAILPWNEKFHVRNPQMIGKDLLVVISDSGKLSF LTFCNEMHRFFPLTHVQLSNPGNSRHQLGRMLAVNTSGCFIAASAYEDRLALFSISMSNG SDIIDERIIYPPEHEGDGSIGRSIQKNSIRGTIWSMCFISQDPNQPSKEHNPVLAILLNR RGEVMNELLLLGWNMRECSVFVISHCREAGPLAHNIVEVPYSYGFAFLFRVGDALLMDLR DAQNPCCVYRTSLNFLPNSVYEPNLAEESCRVHDVDDEGLFNVAASLLELKDCDPMCIDG DNGNVSSANKHVCSWSWEPEIHKIPRLIFCVDTGEFFMIEFFFDSDGPRVNLSECLYKGL ACKALLWVQGGYLAALVEMGDGMVLALENGGLHYTSPIQNIAPILDMSVVDYHDEKHDQM FASCGVAPEGSLRIIRSGISVEKLLKTAPIYQGITGTWTVRMNVTDSYHAFLVLSFVEET RVLSVGLSFTDVTDSVGFQPDVCTLACGLVSNGLLVQIHQNAVRLCLPTKVAHSEGVPLS SPVCTSWFPDNLSISLGAVGHNMIVVSTSNPCFLCILGIRLLSAYHYEIYEMQHLRLQNE LSCISIPQKHFEKKQSSSSVNWVKSRVDAFPVGVDISRTFAVGTHRPSLEILSFLPDQGL RVLASGMISLSNTMGTAIGGCIPQDVRLVLVDRLYIVSGLRNGMLLRFEWPDASKMTSSE LPIYQPISDSLVNTDAALSSKIVPTSFSPQLGEANLFEKTDDYPVNLQLIAIRRIGITPV FLVPMSDSLDADLIALSDRPWLLHTARHGLSYTSISFQPSTHVTPVCSVECPKGILFVAE NSLHLVEMVHSKRLNVQKFHIGGTPRKVLYHSESRLLLVMRTELSNDTCSSDICCVDPLS GVVLSSFKLELGETAKSMELVRVGIEQVLVVGTSLSSGPAIMPSGEAVSTKGRLIVLCLE HVQNSDTGSITFCSKAGSASQRTSPFREIVGYATEQLSSSSLCSSPDDTSCDGVKLEETE AWQLRLAYSTTWPGMVLAICSYLDRYFLASAGNSFYVCGFPSDNPQRMKRFAGGRTRFMI TTLTSYFTRISVGDCRDGVLFYSYHEDSKKLEQLYCDPSQRLVADCILMDVDTAVVSDRK GSIAVLSCSDQLENNASPECNLTLCAAYYMGEIAMSIRKGSYSYKLPADDVLNGIDLSHN TIIASTLLGSIIIFIPISREEHELLEAVQARLVVHPLTAPVLGNDHNDFRSRENPVGVPK ILDGDMLTQFLELTSIQQEAILSLPPGSSETVKSSLKPHLPSPVPVTQVVQLLERVHYAL N NT seq 4146 nt NT seq  +upstreamnt  +downstreamnt atggctgtttcagaggaagagtgttcctccgccaagtcccggtcgtcttcacccgcatct agtagcagcactcactacctcgcaaagtgcgtcctcaaaggaagtgtggtcctccaagtc ctctacggtcatatccgctccccaacctacctcgacgtcgttttcggcaaggagacatca atagagttggtaataattggtgaagatggaattgtacaatctgtatgtgagcagcctgta tttggcacaattaaagatattgccatcctaccctggaatgagaagttccatgtacgaaac ccacagatgataggtaaagacctattggttgttatttctgattcggggaagctctcattt ctcacattctgcaatgagatgcacaggtttttcccgctaacacatgttcaactttccaat cctggaaactcaaggcatcagcttggaagaatgctggctgttaataccagtggctgtttc attgctgctagtgcttatgaagatcgcttggctctgttttccatttcgatgtcaaatggg agtgatatcattgatgagagaataatttaccctcctgaacatgaaggagatggaagtatt ggcagaagcatccagaaaaactctatacgtggtaccatatggagcatgtgctttatttca caagatcctaatcaaccgagtaaggagcataatcctgtgcttgccattcttctaaatagg cggggagaagtcatgaatgaactgctgttattgggatggaatatgagagaatgttctgta tttgttatctctcattgtcgtgaagctggacccttggcgcataatattgttgaagttcca tacagttatggatttgcctttctgttcagggttggtgatgctctcttaatggatcttaga gatgctcagaatccctgttgtgtttatcgaacgagcttaaattttttacctaattcagtg tatgagcctaatttggctgaagaatcatgtagagtacatgatgttgacgatgaaggttta ttcaatgttgctgcatctttgctagagctgaaggactgcgatcctatgtgtatagatggt gacaatggcaatgttagttcagctaacaaacacgtttgctcctggagttgggaaccagaa attcataaaatcccaagattgattttctgtgtagacacgggagaatttttcatgattgaa tttttttttgattctgatggccctagagttaatctatcagaatgtctttataaaggtctt gcgtgcaaggcacttttgtgggttcaaggtggatacctggctgcacttgtggagatgggg gatgggatggtcctcgccctggagaatggaggactgcattacacaagtcctatacaaaac attgcacctatattggatatgtcagttgtggattaccatgacgagaaacatgatcaaatg tttgccagctgtggagttgcaccagaagggtcattaaggattattcgtagtggtatcagt gtagaaaaactgttgaagactgctcctatttatcaaggtataactggtacgtggacagtt cgaatgaacgttactgattcttatcatgcctttcttgtgctatcatttgttgaagagacc cgagttctatcggttggcttaagttttaccgatgtgactgattcagttggtttccagccc gatgtctgtactttggcatgtggccttgtaagcaatggtttgcttgtccagattcaccaa aatgctgttaggctttgtttacccaccaaggttgctcattctgagggtgttcctttgtcc tctccagtttgcacatcttggttcccagacaatttaagtattagcttgggggcagttggg cataacatgatagtcgtttccacctctaatccatgttttttatgcatacttgggatcagg ttgctatcagcttaccattacgaaatatatgaaatgcaacatctgagattgcaaaatgag ttatcatgcatttccatacctcaaaagcattttgagaaaaaacaatcaagttcttctgtc aattgggttaagagccgtgtggatgcttttccagttggagttgacatcagtagaactttt gctgttgggacgcacaggccttcactggaaattttgtcctttttaccagatcaaggccta agagtgcttgcttcagggatgatttcattatcaaataccatgggaactgctataggtggc tgcattcctcaagatgtaaggcttgtattggtcgataggctttatatagtgtctggtttg aggaatggaatgctgcttcggtttgagtggcctgatgcctccaaaatgacctcatcagaa ttacctatataccaacctatcagcgactctttagtaaatacagatgctgctttgtcaagt aaaatagtaccaacttcttttagcccacagctgggtgaagctaacctttttgagaagaca gatgactatcctgtcaatcttcagttgattgccattcgtcgcattggcattactcctgta ttcctggttcccatgagtgattcacttgatgctgatttaattgctctcagtgacagaccg tggttgttgcatactgcaaggcatggcctctcttatacgtctatctcatttcaaccttca acacatgtgacccctgtttgttctgttgaatgtcctaaaggaatcttatttgttgctgag aacagtctacatttggttgagatggtgcacagtaagaggcttaatgtgcagaaatttcat atcggaggcactccacggaaggtcctatatcatagtgaaagcaggctattgcttgtaatg agaaccgaattgagcaatgatacatgttcatccgacatttgttgtgtggatccccttagt ggggtggtcctatcatcttttaaacttgaacttggagaaacagcaaaatccatggagtta gtgagggttggaattgaacaggtcctggtggttgggactagtctatcttctggtccagcc ataatgcccagtggtgaagctgtgagtaccaaaggccgtcttattgtcctctgccttgaa catgtgcaaaattcagatactggttcaataacattctgctcaaaggcaggatccgcttct caacgaacttcgccatttcgcgaaattgttggatatgccaccgaacagctatcaagcagt agtctctgcagcagcccagatgatactagctgtgatggagtcaaacttgaagagactgag gcatggcaattgcgattagcttattcaactacctggcctggaatggtccttgcaatatgt tcttatcttgatcgttacttcttggcatctgctggtaatagtttttatgtatgtggtttt ccgagtgacaatcctcagaggatgaaaaggtttgctggaggaaggacacgctttatgata acaactttgacttcatattttactagaatatctgttggtgattgccgtgatggtgttctt ttctattcttaccatgaggattccaaaaaactggagcaactgtactgtgatccatcacag aggttagttgctgattgtattcttatggatgttgacacagctgttgtttcagatcggaag gggagtatcgctgttttgtcatgttcagatcaattagaaaataatgcaagtccagaatgt aacttgacactgtgcgctgcttattatatgggtgagatagccatgagcatcaggaaggga tcatattcatataagcttccagctgatgatgtgctgaatggtattgacttgtcgcacaac accatcattgccagtacactattaggaagcataataatctttattcctatatccagggaa gaacatgaactcttagaagctgtccaagctagacttgtggttcatccattgactgctcct gttctgggaaatgatcataatgatttccgtagccgtgaaaatccggttggggtaccgaaa atacttgatggcgacatgctgactcagttcttggagctcacaagcatccagcaagaggct atattgtcgttgcctcctggttcatcagaaacagtaaaatcaagcttgaaaccacatcta ccttcacctgtcccagtgactcaggtggtgcaactccttgaacgagttcattatgccttg aattga

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