Juglans regia (English walnut): 109011920
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Entry
109011920 CDS
T05245
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109011920
03041 Spliceosome [BR:
jre03041
]
109011920
03036 Chromosome and associated proteins [BR:
jre03036
]
109011920
Enzymes [BR:
jre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109011920
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109011920
mRNA cycle factors
Common to processing body (P body) and stress granule
109011920
Spliceosome [BR:
jre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109011920
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109011920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
109011920
NCBI-ProteinID:
XP_018848856
UniProt:
A0A833Y024
A0A2I4GY71
LinkDB
All DBs
Position
3:2376162..2381455
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AA seq
619 aa
AA seq
DB search
MTTSWADSVANTASENVATGSSNSNGLKRPTRSTYVPPHLRNRQPPSSDPPAQLQTSSPA
NDRVNYGGITTKSHWGGGSRPDFGRTGHNGSIGGRGGSGWNSRSGGWERGREREVNPFGD
DENLMQEFSEEENTGINFEAYDDIPVETSGNNVPPPVNTFAEIDLGDALNQNIWRCKYVK
PTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQYVQRPRGARIVYPLAL
ILSPTRELSCQIHNEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDL
LERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGARQTMLFSATFPKEIQ
RLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLIHAQKENGVQGKQALT
LVFVETKKGADSLEHWLCLNGFPATTIHGDRTQQERELALRLFKSGKTPILVATDVAARG
LDIPHVGHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNDNNSSMARPLADLMQEAN
QEVPAWLTRYASRASYGGGGGRNRRTGGGRFGGRDFRRDGSFNRATDYYGGANSSGGYGF
SGGYGGGGGYGAGVTSAWD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttcatgggcagattctgtggctaacactgcgtctgagaatgtggcaactggt
tcttctaatagcaatggcttaaaacgccctacccgatcaacctatgttccgcctcatctt
cgtaataggcaacctccttcatcagacccccctgctcaattacaaacttcttcaccagcc
aatgatcgggttaactacggtggaatcacaaccaagtcacactggggtggaggttctagg
cccgacttcgggcgtacaggacataatggttctattggtggccgagggggtagtggatgg
aatagtagaagtggggggtgggaacgagggagagaacgtgaggtgaacccttttggtgat
gatgaaaatttaatgcaagaatttagtgaggaagaaaatacgggtattaactttgaggct
tatgatgacattcctgtggagacgagtgggaacaatgtgcccccacctgtgaatactttt
gcagagattgacttgggggacgcattgaatcaaaatatttggaggtgcaagtatgtgaaa
ccaactcccgtacagcgttatgctataccaatttctcttgcggggcgggatctaatggct
tgtgctcagactggatcagggaagactgctgccttttgctttccgattatcagtggaatc
atgcggggccagtatgttcagagacctcgtggagcacggattgtgtaccctcttgctcta
attctttcacctacaagggagttatcatgccagatacacaatgaagcaaaaaagttttcc
tatcaaactggtgtcaaggtggtcgttgcctatggaggagcaccaatcaatcaacagttg
cgagagcttgagagaggagttgatatccttgtggcaactccaggccgattggttgatttg
cttgagagggctagagtctcgttgcagatgatcagatatttggctcttgatgaggcagat
cggatgctggatatgggttttgagccccaaatccgaaagatagtggagcaaatggacatg
cctccaccaggtgcgagacagacgatgctgtttagtgccacctttcctaaagagatacag
aggttggcatctgattttctttcaaattacatatttttggctgttggaagggttggttca
agtactgatttgattgtccaaagagttgaatttgttcacgagtctgataagagaagccat
cttatggatcttattcatgctcagaaggaaaatggagttcagggcaagcaagccttaaca
ttagtttttgtggagacaaagaagggagctgattcattggagcattggttgtgccttaat
ggatttcctgcaactaccattcatggtgatagaacacaacaggagagagaactagcatta
agattgttcaaaagcggaaagacaccaattttagtggcaacagatgtggcagcacgtggt
cttgacattcctcacgtagggcatgtggtcaactttgatcttccaaatgacattgatgat
tacgttcaccggataggacgtacagggcgagctggaaaaacaggattggcaacggctttc
tttaacgacaataattcatcgatggcaaggccactagctgatctaatgcaagaagcaaat
caagaagtacctgcttggcttacacgttatgcatcaagggcttcttatggtgggggtggt
ggcagaaatcggcggactgggggaggccgttttggtggccgtgattttaggagggatggt
tcatttaatagggccacagattactatggtggagcaaatagtagcggtggctatgggttt
tctggtggttatggcgggggtggggggtatggtgcaggcgtgaccagtgcttgggattag
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