Juglans regia (English walnut): 109012012
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Entry
109012012 CDS
T05245
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 4-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109012012
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
jre01009
]
109012012
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109012012
03019 Messenger RNA biogenesis [BR:
jre03019
]
109012012
03041 Spliceosome [BR:
jre03041
]
109012012
Enzymes [BR:
jre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
109012012
Protein phosphatases and associated proteins [BR:
jre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
109012012
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109012012
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109012012
Spliceosome [BR:
jre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109012012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
109012012
NCBI-ProteinID:
XP_035539053
UniProt:
A0A2I4GYL9
LinkDB
All DBs
Position
12:complement(30389762..30396585)
Genome browser
AA seq
316 aa
AA seq
DB search
MASQGPVLIDPPVLDDIIRRLTEVRSAKPGKQVQLSETEIKQLCVASKDIFIRQPNLLEL
QAPIKICGDIHGQYSDLLRLFEYGGFPPHANYLFLGDYVDRGKQSLETICLLLAYKIKYP
ENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDSFNCLPVAALIDDKILCMHGG
LSPDLTNLDQIRNLTRPTAIPESGLLCDLLWSDPGRDVKGWGMNDRGVSHTFGPDKVAEF
LEKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDEDLLCSFQI
LKPAEKKAKFMMSNKM
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacaaggtcctgtattaattgaccctcccgtcctggacgacataatcagacgg
ctgacggaggttcgttctgcgaagcccggcaagcaggtccagctctcagagacggagatc
aagcaactctgtgttgcttctaaagatatctttattcgacagcccaatcttctagaacta
caagcccccatcaagatttgcggtgatatccatggacaatacagtgatttattaaggctt
tttgaatatggaggatttcctcctcatgccaattatttatttttgggggactatgtggat
cgtggaaagcagagcttagaaacaatatgccttttgcttgcctataagattaaatatcca
gagaacttctttcttctaagaggaaatcatgaatgtgcttctattaaccggatatatgga
ttttatgacgaatgtaagcggcgattcaatgttagactatggaaggcctttacagactct
tttaactgccttccggtggcagctcttatagatgacaaaatattgtgcatgcacggtggt
ctttcccctgatctgacaaacttggatcagattcgaaatttaactcgtcctactgccata
ccggagtctggcttgctttgcgatttgctttggtcagatcctggtagagatgttaaagga
tggggaatgaatgacagaggagtgtcacacacctttggtcctgataaggtggcggaattc
ttagagaagcatgatttggacctcatctgtcgtgcccatcaggtggtggaggatggatat
gaattctttgccaacaggcagcttgttacgatattttcagcccccaattactgtggtgaa
tttgataacgctggtgcaatgatgagtgtagatgaagacttgctgtgctctttccagatt
cttaagccagcagagaaaaaggccaagttcatgatgtcaaacaaaatgtga
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