Juglans regia (English walnut): 109012220
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Entry
109012220 CDS
T05245
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
109012220
04121 Ubiquitin system [BR:
jre04121
]
109012220
Enzymes [BR:
jre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109012220
Membrane trafficking [BR:
jre04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109012220
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109012220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Prok-RING_1
zf-RING-like
Rad50_zn_hook
zf-Nse
zf_Rg
zf-RING_Vps41
VPS18_RING_C
Cytochrom_c3_2
Motif
Other DBs
NCBI-GeneID:
109012220
NCBI-ProteinID:
XP_018849298
UniProt:
A0A833U702
A0A2I4GZI1
LinkDB
All DBs
Position
15:complement(11965246..11978933)
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AA seq
381 aa
AA seq
DB search
MSFSGGNPGAGGGGAAGSAAAVSQLYFCHQCHGMVTLTPSPAFDLACPNCHGEFLEELET
PNPNSEPNSNPFFTSSDLPLLFSSATSASSTPSNAVPPIFNDLSSLFGVPRTSPFQDPEA
FNPFLFLQNYLQNLGGNVEVVINSGGDPGFRGGVVGPNLNLGDYFFGPGLEQLIQQLAEN
DPNRYGTPPASKSAVQELPNITISEDLLASDSWQCAVCKDTFELGEEAKQMPCKHIYHSD
CILPWLELHNSCPVCRHELPTDDPDYEQRTLSRSLSSGAGNQSQTWPASAVSGGSGGAGD
IGTANQSETVGAGENPLTPGTVERRVRISLPFPWPFRAFGSPAETSNSGSGNNNASNDAE
GNSGNRGTQNFQSETRQEDLD
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttccggcggaaatcccggtgctggtggtggtggcgcagcgggcagcgctgca
gctgtgtctcagctttacttctgccaccaatgtcacggtatggtgaccctaaccccatct
cctgccttcgatcttgcctgtcccaattgccatggcgagttcctcgaagaactcgaaacc
cctaaccctaactctgagcccaactccaatcccttctttacttcctccgatctccccctt
ctcttctcctcggccacctctgcctcctccaccccctctaatgccgtcccccccatattc
aacgatctttcctccctcttcggcgtcccccgaacttcccccttccaagaccccgaagcc
ttcaacccatttcttttcctgcagaactaccttcaaaacctgggcggcaacgttgaggtc
gttatcaattctggcggcgacccggggttccgtggcggtgtcgttgggcccaatttaaat
cttggcgactatttctttggccctggactcgagcaattgatccaacagcttgccgagaac
gatcctaatcgatacggcacgcctccggcatcaaaatcagcggtccaggaattaccgaac
atcacgatttcagaggatttgttggcctcggattcgtggcagtgcgcggtgtgcaaggac
acgttcgagctgggcgaggaggccaagcagatgccgtgcaagcacatttaccattccgat
tgtattcttccctggttggaactgcataattcttgtcctgtttgtcggcatgagctgcca
accgatgatcccgactacgagcagaggactctcagtaggtcattatcctcgggggctggg
aatcagagtcagacttggccggcttccgctgtttctggtggcagtggtggtgctggagat
attgggactgcgaatcagagtgagactgtgggtgctggagagaatccactgactccgggg
acggtggagcggagggtcaggatctcgttgccatttccatggccatttagggcattcgga
tcacctgctgagaccagcaatagtgggagtggtaataacaacgcaagcaatgatgcggaa
gggaattcggggaacagggggactcagaacttccagtcggagaccagacaggaagatctg
gattga
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integrated database retrieval system
