KEGG   Juglans regia (English walnut): 109012357
Entry
109012357         CDS       T05245                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
jre  Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:jre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:jre03041]
    109012357
Spliceosome [BR:jre03041]
 Complex B
  Other components
   Complex B specific factors
    109012357
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd LisH_TPL Beta-prop_EML NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_LRRK2 VPS8_N Beta-prop_HPS5 Beta-prop_WDR19_1st DUF7165 PROPPIN Beta-prop_IP5PC_F zf_topless WD_LRWD1 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 109012357
NCBI-ProteinID: XP_035544854
UniProt: A0A6P9EBT8
LinkDB
Position
1:complement(1962688..1978902)
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSVETFVADINSGRWDAI
LPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEH
LLVRTYFDPNEAYQDSTKEKRRAQIAQALAAEVTVVPPSRLMALIGQALKWQQHQGLLPQ
GTQFDLFRGTAAMKQDVDDIYPTTLQHTIKFGTKSHAECARFSPDGQFLVSCSVDGFIEV
WDYISGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLERAHSQGVTSLVFSRDGTQLLSASFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTTD
GSRVITASSDCTVKVWDAKTTDCLQTFKPPPPLRGGDASVNSVHLFPKNTDHIIVCNKTS
SIYIMTLQGQVVKSFSSGKREGGDFAAACVSPKGEWIYCVGEDRNMYCFSYQSGKLEHLL
KVHEKDVIGVTHHPHRNLVATFGEDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtccaccctagaaattgaagccagagatgttatcaagattgtgctccaattttgcaaa
gaaaattctttgcaccaaacttttcagacgttacagaacgagtgccaggtttctttgaat
actgtggacagcgtggagacgtttgttgccgatatcaatagtgggaggtgggatgcgata
ctgcctcaagtggctcagcttaagctgcccaggaataaattggaggatttgtatgagcag
attgtattagaaatgattgaacttcgagagttggataccgcacgagctattttgaggcaa
actcaagtgatgggtgtcatgaagcaagagcaaccggaaagatatttgagacttgaacat
ctcctagtcagaacttactttgatccaaatgaggcttaccaagattcaactaaggaaaaa
cgccgtgcacaaattgcccaagctcttgctgccgaagttactgtggtgccaccttcacga
ttaatggctctgattggtcaggctctgaagtggcagcagcaccaaggtttacttccacaa
ggaacacagtttgacttatttcgaggaaccgctgctatgaaacaagatgtggatgacata
tatccaactactcttcaacacacaataaagtttgggacaaaaagtcatgccgaatgtgcc
cggttctcaccagatggacagtttcttgtctcatgctctgtcgatggatttattgaggtc
tgggattacatcagtgggaagctcaagaaggatcttcagtaccaggctgatgaaacattc
atgatgcatgatgatccggtgctttgtgtcgactttagcagagattctgagatgcttgca
tctgggtcacaggatggaaagattaaagtttggcgtataaggactggtcaatgcttgcgc
cgtcttgaacgtgcacattctcagggtgtcaccagtcttgtcttctctcgagatggaacc
cagttactaagtgcatcatttgacagcacagctagaattcatggcttgaaatctgggaag
ttgttgaaagaatttcgtggccattcgtcttatgtgaatgatgctatctttacaacggat
gggagtcgtgttattactgcttctagtgattgcactgtgaaggtctgggatgcgaagaca
acagactgtctacaaacatttaagccgccgcctcctttacggggtggagatgcttctgtg
aattctgttcatcttttccccaaaaatactgatcacattattgtatgtaataagacatca
tcgatctacattatgacacttcaaggacaggtcgttaagagtttctcatctggtaaaaga
gaaggtggagactttgctgctgcctgcgtgtcaccaaaaggggaatggatttactgtgtt
ggtgaagacaggaatatgtactgcttcagctaccagtctggtaaactcgagcatctactg
aaggtccatgaaaaagatgtaattggcgtcacccatcatccacacaggaaccttgttgct
acctttggtgaagactgcaccatgaaattgtggaagccttga

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