Juglans regia (English walnut): 109012454
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Entry
109012454 CDS
T05245
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase-like
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jre03016
]
109012454
Enzymes [BR:
jre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
109012454
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109012454
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
MetW
Methyltransf_12
Ubie_methyltran
Methyltransf_9
Methyltransf_8
Nup96
DUF2226
Motif
Other DBs
NCBI-GeneID:
109012454
NCBI-ProteinID:
XP_018849637
UniProt:
A0A2I4H0H7
A0A833T937
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Position
16:3463785..3467494
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AA seq
390 aa
AA seq
DB search
MLYKNLSVIRCFYRSREAISVLISVHRLPHSGIFSTMRDIDIKGASSLCSVVSDGKSEIP
QIVSVGQNTGKSPLNVQSTPEIEKRFVHHVYDAIAPHFSSTRFAKWPKVASFLSSLPSGS
LVLDAGCGNGKYLGLNPDCFFIGNDISAPLIKICADRGHEVLVADAVNLPYRTNFGDAAI
SIAVLHHLSTETRRKKAIEELVRVVKKGGLVLITVWAAEQEDRSLVAKWTPLTEKYAEEW
IGPGSPHARSPSSLLLQSIPESEENGSGENVKDSKDSSMEKMHEIIHLTSQSNNDSVTFK
HEKNTNSQQEYFVPWHLPYHRAEVSGVSASALANGLAKKDDKKGAVVYNRYYHVFSEGEL
ERLVTGMDYVVIVDRFYDKSNWCIILEKIL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctttataagaatttaagcgtgattagatgcttttatcgatcccgggaggccattagt
gtactcatttctgttcataggctccctcattcaggaatcttcagcactatgagagacatt
gatataaaaggtgcttctagtttgtgtagcgttgtatctgatggaaaatctgaaatccca
caaattgtatctgttggtcagaatactggaaagtcacccttaaatgtacagtccacccct
gaaatcgaaaagaggtttgtgcatcatgtgtatgatgctattgctccccatttcagttca
acccggtttgcgaagtggccaaaagtggcctcctttttatcatctttgccttcaggatcc
cttgttctcgatgcaggatgtggtaatggtaaatacttgggtctgaatcctgattgcttt
ttcataggaaatgatataagtgctccccttatcaaaatttgtgcggatagagggcatgag
gttctggttgcagatgcagtaaatcttccatacagaactaattttggtgatgcagcaatc
tctattgctgtattacatcatctaagtacagagactaggagaaaaaaagcaattgaagaa
ttagttagagttgtcaaaaagggaggcctggttctgataactgtttgggctgcagaacaa
gaggatagatcattggttgccaaatggactccacttacagaaaagtatgctgaagagtgg
ataggaccaggtagtcctcatgctcgtagcccttcgtccttactgttacaaagcatccct
gaaagtgaggagaatggttcaggagagaatgtgaaagattccaaggacagttcaatggag
aagatgcatgaaatcattcatcttacatctcaaagtaacaatgattcagttacctttaaa
catgaaaagaataccaacagtcaacaggagtattttgttccttggcacctaccctatcat
cgtgctgaagtaagtggtgtttctgcttctgctcttgcaaatggtctggctaagaaagat
gataagaagggtgctgtagtctacaacagatattatcatgttttcagtgaaggcgagctt
gaaaggttagtaactggtatggactatgtagtcattgttgatcggttttatgacaaatca
aactggtgtatcattcttgagaaaattctatga
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