Juglans regia (English walnut): 109012967
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Entry
109012967 CDS
T05245
Name
(RefSeq) terminal nucleotidyltransferase 4B
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109012967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109012967
03016 Transfer RNA biogenesis [BR:
jre03016
]
109012967
Enzymes [BR:
jre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109012967
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109012967
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109012967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
PAP_NTPase
TUTase
Polbeta
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
109012967
NCBI-ProteinID:
XP_035543685
UniProt:
A0A6P9E6D1
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All DBs
Position
2:complement(34172681..34180389)
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AA seq
533 aa
AA seq
DB search
MEEDTTETQTQAFLYETLSPLALSTADKSPPSDHIEPYTVFRNEISLSTLDSDSHETTAP
DFFLLDVGAVSEDSERIFSTLTPVPKMPSREAGTPMLESSWFRGNYRFKSPMLQLHKEIV
DFCDFLSPTLEEQAARDTAVECVFDVIKHIWPHSKVEVFGSFKTGLYLPTSDIDVVILDS
GLGNPQKGLLALSRALSQRGMAKNMQVIGKARVPIVKFVEKKSGVAFDISFDVSNGPKAA
EFIKDAVSKWPPLRPLCLILKVFLQQRELNEVYSGGISSYALLTMVMAMLQSLREFQAPP
EHNLGVLLVRFFYFYGCQLNTTDVGVSCKGAGTFFSKRMKGFTTNGRPFLIAIEDPEAPE
NDIGKNSFNYIQIRSAFAMAFSTLTNPKVIIGLGPNRSILGTIIRPDPVLMERKGGSNGE
VTFNSLLPGAGEPLQHQHGGQQEILCNWQLEDEDLLPRGNDMAGESAHSSGKKRKASWKK
KFNKKVKQNAEVGKVMQEENGSRGETRRTKNRWRHNRDANGFGRHTGGSSRSR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggatactaccgaaacccaaacccaagcctttctctatgaaacccttagcccc
ctcgctctgtccaccgccgataaatctcctccgtccgatcacatcgagccttataccgtt
ttccgtaacgagatatctctctccactctcgattcagattcccatgagactaccgcaccc
gatttcttcctcctcgacgtcggcgccgttagcgaggactccgagcgtatcttttctacg
ctgacgccagtgccgaaaatgccatctcgcgaagccgggacgccaatgcttgagagtagt
tggttccgtgggaactatagatttaaaagccccatgcttcagcttcataaagagatcgtg
gatttttgcgattttctatctccaactctagaagagcaagctgctcgtgatacagctgta
gaatgtgtctttgatgttattaagcatatatggccccactccaaggtagaagtttttgga
tcattcaagacagggctctatcttccaactagtgatattgatgtcgtgattctggattcc
ggtcttggaaacccgcaaaaaggtttgctggctctttcaagggcactttcacagagagga
atggcaaagaatatgcaggtgattgggaaggctcgtgtgccaattgtcaaatttgttgaa
aagaaaagtggtgttgcatttgatataagctttgatgtgtcgaacggacccaaagcagct
gagtttatcaaggatgcagtctcaaagtggcctccattaaggccattgtgtttgatcttg
aaagtatttttacaacagagggaactgaatgaggtatattctggtggaataagttcttat
gcactccttaccatggtcatggcaatgttgcagagtctccgtgagttccaagcacctcca
gaacataacttgggagttctgctggtacgctttttttatttctatggatgccaattgaac
actacagatgttggtgtatcttgcaaaggggctggcacctttttctcaaagagaatgaaa
gggtttacaactaatggacggccatttctcatcgcaattgaggaccctgaggcacctgag
aatgacattgggaagaattccttcaactatatccagattagatcagcttttgcaatggct
ttctcaacattgacaaatcctaaggtaatcattggcctaggccccaacagaagcattctt
ggtaccataattagacccgatcctgtcttgatggagcgcaaaggagggtctaacggagag
gtgacgtttaacagcctgcttcctggagctggtgagccattacagcatcagcatggaggt
cagcaggagattttatgcaattggcagttagaagatgaagatctgctgccgcgtggaaac
gatatggctggagaaagtgcacattcctcgggaaagaagaggaaagcttcttggaaaaag
aagtttaataagaaggtgaaacagaatgcagaggtagggaaggtcatgcaggaagaaaac
ggctcaaggggagagacgcgaaggacaaagaatcgttggaggcataatcgtgatgccaat
ggttttggccgtcatactggtggatcttcacggagtagatag
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