Juglans regia (English walnut): 109013002
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Entry
109013002 CDS
T05245
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
109013002
04121 Ubiquitin system [BR:
jre04121
]
109013002
Enzymes [BR:
jre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109013002
Membrane trafficking [BR:
jre04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109013002
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109013002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
Rad50_zn_hook
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
109013002
NCBI-ProteinID:
XP_018850446
UniProt:
A0A2I4H2Q7
A0A833WV51
LinkDB
All DBs
Position
14:8624229..8625948
Genome browser
AA seq
372 aa
AA seq
DB search
MSSPATSYWCYRCTRFVRVWTQDNAITCPHCDGGFIEEIQAAPSSDNPHRRFAASAMYLF
GNNGQDSDQTPSLGSRRSRRSSGSRSSFNPVIVLRGGTGDSAGDGDGERNSFELYYDDGA
GSGLRPLPATMSEFLMGSGFDRLLEQLAQIEVTGFGRPENPPASKAAIESLPTIEIADNH
VGSESHCAVCKEAFDLGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSERNEGDN
SEEETVGLTIWRLPGGGFAVGRFAGGRRAAAERELPVVYTEMDGGFGASGAPRRVSWVSR
RSRGRESGGFRRAFRNFFSFLRFRPNSSSSNSGPESRSMSRSHSHSGSVFSRYVRRRSSA
WVLEDQSRNGRW
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcctgcaacgtcgtattggtgttacagatgcacgcgcttcgttcgcgtttgg
acccaagataacgccatcacttgtccccactgcgacggagggttcatcgaagagatccag
gccgcgccttcatcggataatccccaccgtcgattcgcagcctccgccatgtacttgttc
ggaaacaacggtcaagattctgaccagaccccgagcctggggtcccgccgtagccgccga
agctccggtagccggtcatcgtttaatccggtcatcgtactccgtgggggtacgggggat
tctgcgggggatggggatggagagaggaacagcttcgagttgtactacgacgatggggct
gggtccgggcttcgtccactgccggcgaccatgtcggagttcttgatgggctcgggcttc
gatcgtttgctggagcagcttgcccagatcgaagtaaccggattcgggcgtcctgagaat
ccacctgcatcgaaagccgcgattgagtctttacccacgatcgaaattgcggataaccac
gttggctctgagtctcactgcgccgtctgcaaggaagctttcgatcttggcgcggaggcc
cgcgagatgccgtgcaagcacatataccactcggactgtatcctcccctggctttctcta
agaaactcgtgcccggtttgccggcacgagttgccgagcgagcgtaacgagggtgataac
tctgaggaggagacggtggggttaaccatatggaggctaccgggaggtgggtttgcggtg
gggaggttcgctgggggaagaagagcagccgcggagagagaactaccggttgtgtacacg
gaaatggatggtgggttcggggcaagtggggctccgagaagggtttcgtgggtttctaga
cggagtagagggagagagagtggtggatttcgcagggctttccgcaatttcttctccttc
ctgaggtttaggcctaattcatcatcttcgaactctgggcctgaatctcggtctatgagc
agaagccatagtcattcgggttcggtgttcagtaggtatgtgagaaggcggagcagcgct
tgggttttggaggatcagagtaggaatgggaggtggtga
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