KEGG   Juglans regia (English walnut): 109013179
Entry
109013179         CDS       T05245                                 
Name
(RefSeq) cullin-3A-like
  KO
K03869  cullin 3
Organism
jre  Juglans regia (English walnut)
Pathway
jre04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109013179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:jre04121]
    109013179
   03400 DNA repair and recombination proteins [BR:jre03400]
    109013179
Ubiquitin system [BR:jre04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     109013179
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109013179
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 DNA_repr_REX1B RecE_M WAC_Acf1_DNA_bd
Other DBs
NCBI-GeneID: 109013179
NCBI-ProteinID: XP_018850715
UniProt: A0A2I4H3H9
LinkDB
Position
1:259870..272899
AA seq 733 aa
MSAQKKKNFQIEAFKHRVVVDPKYPEKTWKILEHAIHEIYNHNASGLSFEELYRNAYNMV
LHKFGEKLYSGLVTTMTSHLSEISRSIEAAQGEVFLEELNRKWADHNKALQMIRDILMYM
DRTFIPSTHKTPVHELGLNLWRDVVIHSSKTQIRLRDTLLELVYRERNGEVINRGLMRNI
IKMLMDLGSAVYQEDFEQHFLEVSADFYRLESQQFIESCDCGDYLKKAERRLNEEMERVS
HYMDAGSLDKITNVVEKEMIESHMQRLVHMENSGLVNMLLNDKYEDLGRMYNLFRRVPTG
LSIVRDVMTSYIRDTGKQLVTDPERLRDPVDFVQRLLDLKDKYDEIISLAFGNDKTFQNA
LNSSFEYFINLNARSPEFISLFVDDKLRKGLRGVSEEDVEIVLDKVMMLFRYLQEKDVFE
KYYKQHLAKRLLAGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMQGFYA
SHGTELGDGPTLAVHVLTTGSWPTQPSATCNLPAEILGVCEKFRSYYLGTHTGRRLSWQT
NMGTADLKATFGKGQKHELNVSTYQMCVLMLFNNADRLSYKEIEQATEIPASDLKRCLQS
LACVRGKNVLRKEPMSKDIAEDDAFFFNEKFTSKLYKVKIGTVVAQRESEPENQETRQRV
EEDRKPQIEAAIVRIMKSRRTLDHNNIVAEVTKQLQARFLPNPVVIKKRIESLIEREFLE
RDKNDRKMYRYLA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagcgctcaaaagaagaagaacttccagatagaggcgttcaagcaccgggtcgtggtg
gatccgaaataccctgaaaagacgtggaagattctggagcatgcaatccacgagatttac
aatcacaatgctagcgggcttagcttcgaagagctttataggaatgcttacaatatggtg
ctgcacaaatttggagagaaactatactctggactcgtgacaactatgacgtctcatcta
agtgaaatatctagatcaattgaagcggctcagggggaggtattcttggaagagctgaac
aggaaatgggccgatcataacaaggcattgcaaatgatccgagatatattgatgtacatg
gataggactttcattccaagcacccacaaaaccccagttcatgagcttgggttgaactta
tggagagatgttgttattcactccagcaaaacccagattaggcttcgggatacactcctt
gagcttgtgtatagagaaaggaatggtgaagttataaatagaggtttgatgagaaatatt
ataaagatgttaatggatttaggttctgctgtttaccaagaagacttcgagcagcatttt
cttgaagtttcagctgatttttaccgtcttgagtctcaacaattcattgagtcatgtgat
tgtggggattatttaaagaaagctgagagacgtctaaatgaagaaatggagagagtgtcc
cattatatggatgctggaagtttggacaagataactaatgttgttgaaaaggagatgatt
gaaagtcatatgcagagactagtccatatggagaactcaggcttagttaacatgcttttg
aatgacaaatatgaggatttgggaaggatgtataacttgtttcgcagggtgcccactgga
ctgtcaatagttcgggatgttatgacctcctacattcgggataccggcaagcagctagtg
actgatccggaaaggttgagggatccagttgactttgtgcaacgtttgttggatttaaag
gataaatatgatgaaatcatcagtttggcatttggcaacgacaagacattccagaatgct
ttgaattcctcttttgagtacttcatcaatttgaatgctcggtccccagaattcatttct
ttgtttgtggatgacaagctccggaaaggactgagaggggttagtgaggaggatgtggag
attgtactggacaaggtcatgatgcttttccgttacctacaagagaaagatgtatttgag
aagtattacaaacaacatttggccaagaggcttcttgcggggaaaactgtctccgatgat
gcagaaagaagtctgattgttaagcttaaaacagagtgtggataccaatttacgtctaaa
ctggaaggtatgttcactgatatgaagacgtcagaggataccatgcagggcttctatgca
agccatggtactgagttaggggatggccccacattagctgtccatgtactcactacaggt
tcttggcctactcaaccaagtgctacatgcaaccttccagcagaaatcctgggggtatgt
gagaagttcaggagttattatcttgggacgcatactggtcggaggctgtcctggcaaacg
aacatgggcactgctgatttgaaagcgacctttgggaagggccagaagcatgagctcaat
gtttccacctaccagatgtgtgtactgatgcttttcaacaatgccgatcggctgagttat
aaggagattgagcaagccacagagatacctgcctcagacttgaagagatgcctgcagtct
ctggcctgtgtcagggggaagaatgttttgcggaaggagcctatgagcaaggacatagct
gaggacgatgccttcttcttcaatgagaagttcacgagcaagctctacaaggtaaaaata
ggtaccgtggttgctcagagggaatctgaacctgaaaatcaggaaacccggcagagagtg
gaggaggacaggaagcctcagatcgaggctgcgattgtgagaatcatgaagtcacggcgg
acgctagatcataataacattgttgctgaggtcacaaagcagctgcaggctcggttcttg
ccaaaccctgttgtcataaagaaacgaattgaatccctcattgagcgggagtttttggag
agggacaaaaatgataggaaaatgtatcgatatcttgcttga

DBGET integrated database retrieval system