KEGG   Juglans regia (English walnut): 109013264
Entry
109013264         CDS       T05245                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
jre  Juglans regia (English walnut)
Pathway
jre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109013264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109013264
   03041 Spliceosome [BR:jre03041]
    109013264
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109013264
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109013264
Spliceosome [BR:jre03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109013264
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 PHM7_cyt Cut8 SPATA3
Other DBs
NCBI-GeneID: 109013264
NCBI-ProteinID: XP_018850847
UniProt: A0A2I4H3X9 A0A834DAH9
LinkDB
Position
1:complement(14242401..14248028)
AA seq 407 aa
MATTPKTKKRRLVKKSKKDDLQQEVDTTSTSNKKPKTEKPRKPQPQPPPQQQSLNTDSGS
DSDSDSDSLPKLLELFSKGQLIDLISSTALQLPSLSRLVRQVADRDVSHRKIFVHGLGWD
TTRQTLLSAFEPFGEIEDCTLVTDKVSGKAKGYAFVLFKTRKSAQEALKNPTKKIGNRLA
SWQLASVGPGAPLQSQDVASRRIYVNNVPADTDAEILRQFFANFGEIEAGPFGFDQTTGK
SRGFALFVYKSETGAKKVLEEPFRTFQGHRLHCQKATDGKGKNLVQGHVAAQPPLQAQRP
PVLAAAQNSALFGQHPNLNPLYSGFVPSPETGFLAPAGVLNPALVAGALNPSVIPTTQFG
GNQSFLGAHGGSGVGLQHLYPNMQVGQPSAGRNQGGGGSISGYPSYM
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggcgacgacacccaaaactaaaaagcgaaggcttgtaaaaaaatccaagaaggacgat
ctacaacaagaagtcgataccacctccacctccaacaaaaaacccaaaaccgaaaagccc
cggaaaccccaaccccagccaccaccacaacaacaatccctaaacactgattccggatcc
gattccgactccgactcggactccctccccaaactcctggagctcttctccaaaggccag
cttatcgacctcatctccagcaccgcccttcagctcccctccctctcccgcctcgttcgc
caggtggccgaccgcgacgtctctcaccgcaagatcttcgtacatggcctcggctgggac
accactcgccagacactactctctgcctttgagccctttggagagatagaggactgcacc
ctcgtcacagacaaggtcagtggaaaagccaagggatacgccttcgtcttgttcaagacc
cggaagagcgcccaagaggctctcaagaaccctacgaagaagatcggcaaccgactcgcc
tcgtggcagctggcttccgtgggccctggggcaccattgcagtcccaggacgttgcgtcg
cgaaggatttacgtgaacaacgtgccagccgataccgacgccgagatattgagacaattc
ttcgcaaatttcggggagatcgaggcgggtccatttgggttcgatcagaccaccggaaaa
tccagaggctttgcgttgttcgtgtataagagcgagaccggtgccaagaaggttctggaa
gagccgtttagaacatttcaggggcaccgattgcattgccagaaggcaaccgatgggaag
ggcaagaatctggtgcaggggcatgtggcggcacaaccaccgttacaagcgcagcgacca
ccggttttggcagcggcgcagaattcggcactgtttgggcagcacccgaacctgaacccg
ttgtacagcgggttcgttccgagtccagaaacggggttcttggcacctgcaggggtgttg
aacccggcattggtggccggggcattgaacccgagcgtgatcccgaccacccagttcggg
ggaaatcagtctttcctcggggcccacggcgggtcaggtgtgggtctgcagcacttgtat
ccaaacatgcaggtgggacagccgagtgccggtaggaatcagggcggtggtggctctatc
agtgggtacccttcatatatgtga

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