Juglans regia (English walnut): 109013698
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Entry
109013698 CDS
T05245
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109013698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
109013698
Spliceosome [BR:
jre03041
]
Complex A
U1 snRNP components
U1 related factors
109013698
Complex B
109013698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
DUF5471
Motif
Other DBs
NCBI-GeneID:
109013698
NCBI-ProteinID:
XP_018851422
UniProt:
A0A2I4H5K2
A0A833UCX5
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All DBs
Position
13:complement(15626393..15636226)
Genome browser
AA seq
968 aa
AA seq
DB search
MADQPPTLNSNPSLSEPDTLNPQSNQPDPIPPPPPPPPPPPQSSMSTPLSTPIPVNPTSN
ASPLASAPPPPPPPQAPQVSYAPPQVSGGAAVPPAPPSFRPVPQFSPMPNPGLTNFNYQN
PGGVQPPGVSVAPGAVSGGIGASPMAVPQPMLPYQLPPGQPPRPYPSPMPNGYPGVPHHG
TIPPPGLPRYPSPYTPMVRPPFPPRLPGGIGMLPAMSRPPIPGVPGVRPIIPPIVRPIIP
SVTPAEKQQTTVYVGKIASSVENDFILSLLQLCGPVKSWKRAQDPTDGTPKGFGFCEFES
AEGVLRALRLLSKFNIDGQELVLNVNQATKEYLERYVDKKTENSKKLKDAEAAETEKDDE
TAANVESNEHLKSSVEDSNKEENVLGSKENNDFANFGIVTNEDKEVDREALEKLTSMVEE
RLKTRPLPPPPPQAIGDGSGNSNSEVPAKSRDGDSEMRNDAAEDKNDDETTSETKPASEH
DRPETSSPDRSRRYDRRSRDRDRERDMKREKEREIERYERETERERVRKEREQRRKIEEA
ERQYEECLKEWEYREREKEKQRQYEKEREKERERKRKKEIKYDEDDEDDDSRRRWRRSML
EDKRKKRLREKEDDLADRHKEEEEIVEAKRRDEEEQKQKLQIDALRVSSNNLLNESVKTV
LSEASSAEIKDNLVEHGYEGDSACESHMGERIVQNGIGEESTISSIAASETRHTGNAPAK
KLGFGLVGSGKRTAVPSVFHEEEDDDAHKDKKMRPLVPIDYSTEELQAVQPVSGAPSPNL
AAAAEFAKRISNFNPKEDKPDAERERSRRSNEKSSQRDRDRGDENVNRTKDENRERNLDR
DRDRDQGLDRSKTPDNKKLLSLKQLIDMIPKTKEELFSYEINWAVYDKHELHERMRPWIS
KKITEFLGEEETTLVDYIVSSTQEHMKASQMLELLQSILDEEAEMFVLKMWRMLIYEIKR
VETGVASK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccagcctccaaccctaaactccaatccttctctttccgaacccgacaccctc
aatccccaatcaaaccaacccgatcccataccaccaccaccaccaccaccaccaccacca
ccgcaatcgtcgatgtcgactccattgtctacccctatccctgttaaccctacttcaaac
gcttcacctcttgcatctgcgccgccgccgccgcctcctccacaagcgcctcaggtgtcc
tacgcgccgccgcaggtatccggcggagccgcagtacctccagcgccgccttcgttccgc
ccagtcccacagttctcgccgatgccgaatcctggcttgacgaatttcaattaccaaaac
cctggcggggttcagccacctggtgtgagcgtggctcctggtgctgttagtggcggcatt
ggggcctcccctatggctgtgccgcagccgatgctgccttatcagttgccaccgggccag
cctccgagaccttacccgtcgcctatgccaaatgggtacccaggtgttcctcatcatggg
actatacctcctcccggacttcctcgttatccatctccatacacacctatggttcggcct
ccatttcctccacgcttaccaggagggattggcatgcttccagcaatgtcacgtccccca
attccgggggttcctggagttcgccccattataccccctattgttaggccaattattcct
tctgttactccagctgaaaaacaacaaaccacagtatacgttggtaagattgcatcatca
gtggaaaacgatttcattctgtccctccttcagctttgtggacctgtgaaaagttggaaa
cgtgctcaagatcccacagacgggactcctaaaggctttgggttctgtgaatttgagtct
gctgagggtgttcttcgtgcattgcgtctacttagtaaatttaatattgatgggcaagaa
ttggtgttaaatgttaatcaagcaacaaaagaatatctggaacggtatgttgataaaaaa
actgaaaactcgaagaaacttaaagatgcggaagctgcagagactgagaaagatgatgaa
actgcagcaaatgttgagagtaatgaacatctaaagtcctctgtggaggactcgaataaa
gaggaaaatgttttggggagcaaggaaaataatgattttgctaattttggaatcgttacc
aatgaggacaaggaagttgaccgagaggctttggagaagctcacaagcatggtagaagag
agacttaagaccaggcccctgcctccgcccccaccacaagcaattggtgatggctctggg
aattcaaactctgaagtgcctgctaaatcgagggacggggactctgaaatgagaaatgat
gcagctgaagataaaaatgatgatgagacaactagtgaaaccaaacctgcaagtgagcat
gacaggcctgaaacaagttcacctgataggagtaggaggtatgataggagaagcagagac
agagaccgagagcgggatatgaaaagggagaaggagcgggagattgaaagatatgaaaga
gaaacagaacgagagcgggttaggaaagaaagggagcaaagaagaaagattgaggaggct
gagcgtcagtatgaagagtgtcttaaagaatgggagtatagagaaagagaaaaagagaaa
cagcggcagtatgagaaggagagggaaaaagagagggagcgcaaacggaagaaggagata
aaatatgatgaagatgatgaggatgatgattcgagaagaaggtggcgtcggagtatgtta
gaagacaagagaaagaagaggctgcgagaaaaggaggatgacttggctgacaggcataaa
gaagaagaagaaattgttgaggcaaagaggagagatgaggaggaacagaaacagaagcta
caaatagatgcattgagggtctcatccaataatttattgaatgaaagtgtaaaaactgtt
ttgtctgaagcatccagtgccgaaataaaagataatcttgttgaacatggctatgaaggt
gattctgcctgtgagagccatatgggtgaaaggattgtacaaaatggtattggtgaagaa
tcaaccatatcgtcaattgctgcatcagaaacacggcacactggcaatgccccagcgaaa
aagttaggcttcggtttagttggatctggaaaacgaactgctgtcccttctgttttccat
gaggaggaggatgatgatgcacacaaggacaaaaagatgaggccccttgtcccaattgat
tactcgactgaagaactgcaggctgtccaacctgtatctggggcaccatcaccaaatttg
gctgcagcagcagaatttgcaaagcgcatatccaatttcaatcccaaagaagataagccg
gatgcagaaagggaaagaagtagacgctccaatgagaagtcaagccagcgggatagggac
cggggtgatgagaatgtgaatcgcaccaaagatgagaacagagagaggaatcttgacagg
gatagggatcgggaccaggggctggatagatcgaagacaccagataacaagaagcttttg
agtttaaagcaattgatagacatgataccaaagaccaaggaggagttgttctcatatgag
atcaattgggctgtctatgacaagcatgagctgcatgaaagaatgagaccttggatttca
aaaaagataacagagtttttaggagaggaagaaacaaccctggtagattacattgtatcc
agtactcaagaacatatgaaggcatctcaaatgctggagctattacaatccattttagac
gaagaagctgaaatgtttgttctcaaaatgtggaggatgctcatctatgaaattaagagg
gtggagaccggcgtcgcttcaaagtga
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