Juglans regia (English walnut): 109013974
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Entry
109013974 CDS
T05245
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
jre
Juglans regia (English walnut)
Pathway
jre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109013974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109013974
03036 Chromosome and associated proteins [BR:
jre03036
]
109013974
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109013974
Coactivators
SAGA/TFTC/STAGA complex
109013974
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109013974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
109013974
NCBI-ProteinID:
XP_035551565
UniProt:
A0A6P9ERZ1
LinkDB
All DBs
Position
11:31472529..31482353
Genome browser
AA seq
911 aa
AA seq
DB search
MDPSIMKLLEEDEDESMHSGADVEAFQAALNRDIGGDASTSQNSDSDKVLSQVSNHTPSQ
LPQWETANQDQSIECQIQPDQKGAQQLEQPLSGMELKQHASVIENQQQQSDAPDVLNNVQ
MPEKRSQDDSQQGQTQNNSLQNPQTSGMQISEKPSISIHESDRRPGLEGESQYAKLQKMS
NQQATITEQASNPINRSRPGQVPFGVLLPVLQAQLDKDRAMQLQTIFAKLKKNEIPKEGF
VRHMRSIVGDHMLKLAVMKIQSQPSSNQFQLQAQASARQHPQRMPSADSSYPGIENNAQK
SREGNRQSDSHGGQGSQVPSSSASGINPEREQSSIPTQGLNKQQQQHLHFPSIYGSTSGN
YNPYSGTNVNTLTSSVKTHTHEAQTRQISQHQNINSTQLSGTTQAMNTMSIPKFERLNST
NDPKRLQGGSVSHLANNSTSQQIPVPWQSSTNKEQSSALSPSMAGVKQEAIDQVTEPHHK
PPFPHPHGLSSHSAAQLEQGNATPGTVNDEALEKQSSRIGLSTSMSMMPSNSVSPSMAAQ
LDPTVPLGPRIQSAASSAGTNSRTPSKKPSIGQKKPLEALGSSQPLPSKKQKVSGAFSDQ
SIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRVSEASRRAVQEEEEKLILQKTPLQKKLA
EIMAKCGLKSTSNDVERCLSLCVEERMRGLISNLIRLSKQRVDIEKPRHRTLITSDVQHQ
IMTMNKKAREEWDKKQAEAERLRRLNEPEGSNGVDGEKDKDEGRAKSIKANKEEDDKMRT
TAANVAARAAVGGDDMLSKWQLMAEQARQKREGVTDASGSQPGKDASRKPLSTSGRKENQ
DAEKRGNTASIAAFGPLRKSGRNQAIATQTRVARSISVKDVIAVLEREPQMSRSNLIYRL
YEKIRSDGTAE
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggacccttccataatgaagcttctcgaggaagacgaggacgagagtatgcattcgggg
gcagacgtggaggcgttccaggctgccctaaacagagacataggcggagatgcctccact
tcacagaactctgattcagataaagttttgtctcaagtaagcaatcatactcccagtcag
ttaccacagtgggaaactgctaaccaagatcaaagtattgaatgtcaaattcaaccagac
caaaaaggtgcccagcagctagaacaacctttatctggaatggagctaaagcaacatgca
tctgttattgaaaatcagcaacaacagagtgatgccccagatgttctcaataatgtccaa
atgccagagaaaagatcccaagatgatagtcaacagggtcagacacaaaataattcccta
cagaatccccaaacaagtgggatgcagatttctgaaaaaccttccatctcaatacatgag
tcagatagaagacctggtctagaaggtgaatctcaatacgcaaaattacagaaaatgagt
aatcaacaggcgacaatcactgaacaggcaagcaacccaataaatcgttctagacctggg
caagtaccatttggagtgttgctgcctgttttacaagcccaacttgataaagacagagcc
atgcaacttcaaacaatatttgctaagctaaagaaaaacgagatccccaaagaagggttc
gtccggcacatgagaagtattgtaggagaccatatgctcaaattggcagtaatgaaaata
caatcacagcccagttccaaccaattccagttgcaagctcaagcttcagcacggcaacac
cctcagcggatgccatctgctgattcaagctatccaggtatagaaaacaatgctcagaaa
tctcgagaggggaatcgacagtcagattctcatggagggcaaggaagtcaagtgccttct
tccagtgcaagcggcatcaatccggaaagggaacaatcctcaattcctacacaaggactt
aacaagcagcagcaacaacatttgcactttccttccatttatgggagtaccagtggtaat
tataacccatattctgggacaaatgtcaatacgttgacatcatctgtcaaaacacacact
catgaagcacaaacaaggcaaatctcacaacatcagaacataaattcaactcagttaagt
gggacaacacaggcaatgaacacgatgagcattcctaagtttgagaggctaaattctacc
aatgatccaaagagacttcagggtggatctgtttctcacctggcaaacaattcaacatca
caacagataccggttccttggcagtcatcaacaaataaagaacaaagttctgccctttcc
ccatcaatggctggtgtgaaacaggaagcaattgatcaggttacagagccgcatcacaaa
cccccttttcctcatccacatggattatcttctcattctgctgcacagcttgagcaggga
aatgcaacccctggaactgtaaacgatgaggctttggagaagcagtcttcgaggattggc
ctttcgacatcaatgagcatgatgccttccaattcagtttctccttccatggcagcacag
ttggatcctactgtcccgttggggcctcggatccaatccgcagcctcttctgctgggact
aactcaagaacaccttccaaaaagccttctattggccagaagaaaccacttgaagccctt
ggttcatcacaacctctgccaagtaaaaagcaaaaagtatctggggcgttttcggatcaa
agcattgaacaactaaatgatgttactgctgtcagtggagtcaatctgagggaagaggaa
gagcagctattttctgggcccaaggaagacagtcgagtttcagaagcatctcgaagagct
gtgcaagaagaggaagaaaaactcattttgcagaaaactccacttcagaaaaaactggca
gagatcatggccaaatgtggcttgaagagtacaagcaatgatgtggagcgatgcttgtca
ttgtgtgtggaggaaagaatgcgtggactcataagtaatctaataagactatcaaaacag
cgagttgatattgagaaaccaagacaccgtactcttatcacctcagatgttcaacatcaa
atcatgacaatgaacaagaaggctagggaggaatgggataaaaaacaggctgaagcagag
aggctccggagacttaatgaacccgagggtagtaatggagttgatggagagaaagataaa
gacgaaggtcgtgccaagtccattaaggcaaacaaagaggaggatgacaaaatgaggaca
acagctgccaatgttgctgcccgtgctgctgttggaggagatgacatgctgtcaaaatgg
caacttatggctgagcaagcccggcagaaacgtgaaggagtgacggatgcatctggctct
cagccaggtaaagatgcaagtcgcaagcctctatcgacatctggaagaaaagagaatcag
gatgcagagaaaaggggaaacacagcttctattgctgcttttgggcctcttagaaaatct
ggaaggaaccaagctattgcaactcaaacccgggtggctcgtagcatctccgttaaggat
gttattgcagtcctggaaagggaaccccagatgtctaggtctaatctgatatatcgccta
tatgagaaaattcgttctgatggcactgctgaatga
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