Juglans regia (English walnut): 109014079
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Entry
109014079 CDS
T05245
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109014079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
109014079
Enzymes [BR:
jre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
109014079
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109014079
Multi subunit type E3
ERAD complex
109014079
LMBR1L-GP78-UBAC2 complex
109014079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_11
zf-RING_16
zf-RING_5
PHD
zf-HC5HC2H
PHD_NSD
RINGv
zf-RING_Vps41
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
109014079
NCBI-ProteinID:
XP_018851936
UniProt:
A0A2I4H715
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All DBs
Position
10:5333708..5343078
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AA seq
587 aa
AA seq
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MGVRYIAISVLSTVLSFVGLRLRIELSLDELKSNGLISEKFIHSENASRVIELLLGSYAT
IGLLTNFVLNVFVLLVLCLKTLFFAELYPSETRKLLERLIYYVIYKGTFLPLVAPPTIYQ
AGLWSIWLIVLCSLKMFQALARDRLERLNASPSATPWAYFRVYSVLLLVLSVDCFWIRLC
LVIYRTLGSSMFLLLFFEPISIAFETLQAILVHGFQLLDIWLHYSAGSNTNFQRFKLFDT
SAAGSLSEWKGILIRNLGFSLDIATILMALSHYVHIWWLHGMAFHLVDAILFLNIRALLS
ALLKRIKGFIKLREAFGALHAALPNATAEELQAFEDECAICREPMAKAKKLHCKHLFHLA
CLRSWLDQGSSETYTCPTCRKPLFVGRPPNEANHRTGEVLSDEQLAHQISAGLDHQNTSR
HTLPTGVFPNQTQNPLEDDPWRGTGLDSSWVHTWPSQGVEGAGPSTAIRSVGLGRVQMMM
RHLASVGETYAQTALEDGAWNLWPANPSQPATTGPPIPPAAGGRYIGGTNGLHMRTASRP
ANDSMANILAMAETVREVLPHIPDDIILQDLLQTNSVAITVNNLLQM
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcgctatatagccatctcggtgttgtctacggtgctaagctttgttggtctg
cgactccggattgaattgtctttagatgagctaaaatcgaatggactaatcagtgagaag
tttattcactcagagaatgcgagccgtgtcattgagctgcttttgggttcttatgccacc
attggactgctaacaaattttgtgctcaatgtctttgttttacttgttctatgtctaaag
actctattctttgcggagttgtatccttctgaaactaggaagttattggaacgtcttatc
tattatgttatttacaaggggacatttctaccactggttgctccaccaacaatatatcaa
gcaggcttgtggtcaatctggttgatcgtactatgttctttgaagatgtttcaagctttg
gccagagatcgacttgaacgcttgaatgcatccccttctgctactccttgggcatatttt
cgtgtatattcggtgttattgttggtcctctctgttgactgtttttggattaggctatgt
ctagtaatatatagaacgctgggatcatctatgtttctgttgttattctttgagcccatc
agtattgcttttgagacattgcaggctattttagttcatggatttcagttgcttgatata
tggctccattattcagcagggagtaatacaaatttccaaaggttcaaactttttgataca
tcagcagcaggttcattatcagaatggaaaggcattcttattcggaatttggggttttcc
ctggacatagcaacaattttaatggcactcagtcattacgtgcatatttggtggcttcat
ggcatggcattccatcttgtggatgcaatccttttcctaaatatacgtgccttgctaagt
gctcttttgaagcgaataaaaggattcatcaaattgagagaagcttttggtgctcttcat
gctgcccttcccaatgcaacagctgaagagctacaagcatttgaagatgaatgtgccatc
tgtagggaacccatggctaaggctaaaaagttacactgcaagcatctttttcatcttgca
tgcttgagatcttggttggatcaaggttcaagtgagacttatacatgtcctacttgtcga
aagccgctttttgttggcagacctccaaatgaagctaaccaccgtactggagaagttctg
agtgatgagcagcttgcacatcaaataagtgccggacttgatcaccaaaacacttccagg
cataccctacctactggagtgtttccaaatcagacacagaaccctctggaagacgatcct
tggaggggtacaggactggattcaagttgggtgcatacttggccaagccagggtgttgag
ggagctggaccctctactgctatcagatcagttggattagggagagttcagatgatgatg
aggcatcttgcatcagtaggagaaacctatgcacagactgcccttgaagatggtgcatgg
aatctttggcctgcaaatccctctcagcctgccacaactggtccacccattcctcctgct
gctggtggcagatacattggcggcaccaatgggttacatatgaggactgcctcacgccct
gctaatgacagtatggcaaacatacttgccatggctgagactgtaagggaggttttgcca
cacatccctgatgacataattttgcaggacttgctgcaaacaaattctgttgctattacc
gtgaataatcttctccaaatgtga
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