Juglans regia (English walnut): 109014461
Help
Entry
109014461 CDS
T05245
Name
(RefSeq) putative pectate lyase 14
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre00040
Pentose and glucuronate interconversions
jre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109014461
Enzymes [BR:
jre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109014461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109014461
NCBI-ProteinID:
XP_018852476
UniProt:
A0A833Y4J7
A0A2I4H8J8
LinkDB
All DBs
Position
2:31057777..31060061
Genome browser
AA seq
372 aa
AA seq
DB search
MFFAPTASVAKKTKIDSLEMNVIDRCWRWNPDWRRNRPQLATCSVGYAGKMTNNIGKGLT
RYVVTDPSDNPLKPKPGTLRYGVTMLRGKKWITFRRNMRIQLEKPLLIGSFTAIDGRGVE
VHIAGKACLMIYKASNIIIHGLRIHHCRSQAPSSVMGPDSKILPIGPMDGDAIRLVTASK
VWLDHNTLYACEDGLLDVTRGSTDITISNNWFRDQDKVILLGHDDGFLRDKNMKVTLIYN
HFGPNCNQRMPRIRHGYAHVVNNFYQGWMQYAIGGSMNPSVKSQANLFIAPKAGNKEVTW
RKSCGLGEKAGSCNFYSVGDAFENGASFDHSAGGGAAPLYNREQTFLVANSRSVRSLTKS
SGALRCTRRSRC
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcgctcctactgctagtgttgctaagaaaacgaagattgatagcttggaaatg
aacgtgattgatcggtgctggagatggaacccggattggagaaggaacaggccgcaactt
gcgacatgctcagtgggttatgcagggaagatgactaataatattggaaagggcctcaca
cgatacgtggtaactgatccgagcgacaacccgctaaagcccaagccggggaccctaaga
tacggagtaaccatgctcagagggaaaaaatggatcacattccgaaggaacatgcgcatc
caacttgaaaaaccacttctcattggtagtttcacagccattgatggtcgaggtgttgaa
gttcacattgcgggtaaagcatgcttgatgatctataaggcaagcaacattatcattcat
ggccttcggatccaccattgccggtcccaagcaccaagctcagtgatgggtccagactca
aagatattgccaataggtccgatggatggagatgcaatcagattggttacggcatcaaag
gtgtggctagaccataacacactgtatgcgtgcgaggacggtctcctagatgtgacacga
ggttccacagatataacaatctccaataactggttcagagaccaggacaaggtcatcctt
cttgggcacgatgacgggttcttgcgggacaagaacatgaaggttactcttatctacaac
cattttggacctaattgcaaccaaaggatgccaaggatccgccatggatatgcacatgtg
gtgaacaacttttaccagggatggatgcagtacgccattgggggaagcatgaatccgagc
gtcaagagtcaagccaacctttttattgcaccaaaagctgggaacaaggaggtgacgtgg
agaaagagctgcgggctgggggaaaaagcaggatcctgcaacttctactcagtgggggat
gcttttgaaaatggagcttctttcgatcactcggctggtggcggggccgccccgctctat
aaccgagaacaaactttcctagttgcaaattccagatctgtgaggtctttgacaaaatca
tctggtgctttgcgatgtacccgacgctctagatgctga
DBGET
integrated database retrieval system
