Juglans regia (English walnut): 109014491
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Entry
109014491 CDS
T05245
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109014491
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
jre01009
]
109014491
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
109014491
Protein phosphatases and associated proteins [BR:
jre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109014491
Spliceosome [BR:
jre03041
]
Common components
Common spliceosomal components
SR proteins
109014491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nmad2
Motif
Other DBs
NCBI-GeneID:
109014491
NCBI-ProteinID:
XP_018852527
UniProt:
A0A2I4H8Q2
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All DBs
Position
2:30704721..30708962
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AA seq
218 aa
AA seq
DB search
MSYSREARSASPRDSISPVRHRRSRSRSRSISRSRRSRSRSHSGDVANPGNNLYVTGLST
RVTTSDVEKYFGREGKVLECHLVTDPRTRESRGFGFITMETNEDAERCIKYLNRSVFEGR
LITVEKGVVCPSFLPSLAKRKRGRTPTPGRYQGLRDNRRGYGRRRSPSFSPRRWQDKDSY
SKNRRGRSRSPYSRTDDYDSHRRRRERSWSAGPSGYTR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtcatactcaagggaagcaaggtctgcctcgccacgggactctatttcacctgtcaga
catcgtcgatcaaggtcaagatcaagatcaatttcaaggtcgaggagaagtcggtccagg
agtcactctggagatgtagccaatcctgggaataacttatatgtaacaggattgtccaca
agggttactaccagtgatgttgaaaagtattttggcagggaaggaaaggttttggagtgc
catctggttacagatcctcgcactagagagtcccgtggttttgggtttatcactatggaa
acaaatgaagatgcagaacgctgtatcaagtatttgaatcgatcggtctttgaaggtcga
ttgataactgtggaaaagggggttgtatgcccgtctttccttccttcattagcaaaaagg
aaacgtggcagaacaccgacaccgggaaggtatcaaggtttaagagacaatagacgaggg
tatggtcgtagaaggtctccaagcttttcacctcgccggtggcaagacaaagattcctat
tcaaagaaccggcgaggaagatcacgctctccatatagtaggacggatgattatgactcg
cacaggaggcgcagggaacggtcctggtcggctggacctagtggctacactagatag
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