Juglans regia (English walnut): 109014536
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Entry
109014536 CDS
T05245
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109014536
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
109014536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
TrAA12
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
109014536
NCBI-ProteinID:
XP_018852580
UniProt:
A0A6P9EI20
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All DBs
Position
6:5590823..5617097
Genome browser
AA seq
629 aa
AA seq
DB search
MVFITSCARHKPTVHYDNGCVCCEVCGKVLHQDVFTEEPTFVKGAGGESRVAGSYVKSIQ
SGYSESFRRTIDKGRDEIDRMVTAFNISGGDSIINPACSFYQIAVERNFTRGRRTEQVAA
ACLYIACRVARDPKPFLLIDFSEFLGINVYVLGAVFLQLCQLLSLGEHPTIVKPVDPSLY
IPRFAEKLLKERNMKVCGTALHIIASMKRDWIQTGRKPSGLCGAALYISALSHGYRFSKS
DIVKIVHICEVTLTKRLMEFENTDSGSLTVEELIKNASEVKACELSENRSLKSGEVLCEH
KNSGKPHFAHGLCRSCYEDFVELSGGLHGGSEPPAFQQAERERIAMESANNQGDKSNVFL
KPSLGSENIEQLERSQKATKNERLDLRENDGNSAAAIGDQIEIDGVSDACQKSMDTSLVS
DDESDGLSDIDDVEVSGYLNNEEEMRFKKIIWEEMNKEYLQEQAAAAAAKMESQASFQNS
SDELRAAHELAVAAAAAVAKSRKERKRKQDVNANPAQTAAEAAHQMLIKKRLSSKINYDV
LETLFAEKPSSDSNKKLKASNDDGYAKGQSNGEKEHDGDITDNYDELGQGYENLEQEDVN
GTYGNELHAEFENEEDVYGYNYDNGEEEY
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggtttttattactagctgtgctaggcacaagcctactgtacattacgacaatggctgt
gtatgttgtgaagtctgtggaaaagttctccatcaagatgtgttcaccgaagaacctact
tttgtcaagggtgcaggaggagagagtcgagtggcaggttcctatgtaaaatccattcaa
agtggttattcagaatcatttaggagaaccatagataaagggagagatgagatagatcgt
atggttacagcctttaatataagtggtggtgactctataattaatcccgcctgttcattt
tatcagatagcagttgaacggaattttactagggggcgtagaacagagcaagttgctgct
gcctgcctttatattgcatgtcgtgtagctagagatccaaagccatttcttcttattgat
ttttcagagtttctagggataaatgtttatgtgctaggcgctgtatttttgcagctttgc
caacttctaagccttggagagcatcctactattgtaaaacctgttgatccttcactttat
attcctcgatttgcagaaaaactattaaaggaaaggaacatgaaggtctgtggaactgca
ttacacattatagcaagcatgaaaagagattggattcagacaggcagaaaacctagtggg
ctgtgtggtgcagcattatatatatctgccctttcacatgggtacagattttcaaagtct
gacattgtaaaaattgtgcatatttgtgaggtaacgctaacaaaacgattgatggaattt
gagaatacagattcagggagcttaacagttgaggagttgattaagaatgcttcagaggtt
aaggcatgcgagctatcagagaataggtctctcaagtctggggaagtgctgtgtgaacat
aaaaatagtgggaaacctcattttgctcatggactttgcagaagttgttacgaagacttt
gttgaactttctgggggactgcatggtgggtcagaacctcctgcatttcagcaggctgaa
agggagagaatagccatggaatctgccaataaccagggggacaaatcaaatgttttctta
aagccttcgctagggtcagaaaacattgaacagcttgaaagaagccaaaaggcaaccaag
aatgaacgattggatctgcgagagaatgatggtaattctgctgctgccattggagatcag
attgaaatagatggtgtttctgatgcatgccagaaatccatggatacaagtttggtcagt
gatgatgaatcagatggcctttctgatattgatgatgttgaggtgagtggctatctcaac
aatgaggaggagatgcgttttaagaagattatctgggaggaaatgaacaaagagtatctt
caggaacaagcagcagctgctgctgctaagatggaaagtcaggccagctttcagaactct
tctgatgaattgcgagctgcacatgaattagctgtggcagctgcggcggctgttgcaaag
tcaagaaaggagcggaaacgaaaacaagatgtgaatgccaatcctgctcaaactgctgca
gaagcagctcatcaaatgctgatcaagaagagactcagttcaaaaatcaactacgatgta
ttggagacactctttgcggaaaagccatcttctgattcgaataaaaagctcaaagcatca
aatgatgatggctatgccaaagggcaaagtaatggtgagaaagagcatgacggggatatc
acagacaattatgatgaactgggacaagggtatgaaaacttggaacaggaagatgtcaac
ggaacatatggcaatgaattgcatgcggaatttgaaaatgaagaggatgtttatggttat
aactatgataatggtgaagaggaatattga
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