Juglans regia (English walnut): 109015907
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Entry
109015907 CDS
T05245
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
109015907
Membrane trafficking [BR:
jre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109015907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
109015907
NCBI-ProteinID:
XP_018853906
UniProt:
A0A2I4HCM3
A0A833TFX9
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All DBs
Position
14:2920120..2928997
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AA seq
1403 aa
AA seq
DB search
MASSPFEEVDQTDEDFFDRLVNDEIDFTGLGPSVLKNDGLEEAKVFSNLSMAEVGSAAVD
SGSNAGFEVNGEVAREDMVVSASLVEVNEDNLASKESNSSIPENRNESNNMVAKESISLL
SSNRNGVSEGGIEEDCALDSTVGTNSVAAGAGMKEVQWSSFGSNNDVGGAGFGSYSDFFS
ELGDSSEDPFASVANMGKSKMESNVVHDVLENPVANLGASGYEQPHEGQYLGVGTGQNLD
GQDSRSSDCWESLYPGWKYDANTGQWYQLEGNDANTNADINVNANAYAMGNEVLLDQAAY
YQLQAAQAQSVAGTAAEGCTAGSVSHWNQTSQGNMHYPVHMVFDPQYPGWYYDTITGEWK
LLESYIPASNQLTSIDDNQQFLNQNVENHGSQSLVDQDGSAIHYNQQVLNTWQTQDVAKS
DARGFTENRKSGDHYSSISHLTNSMDQQSRFNPDGSLAQFEQPNWNVDGSNKFSGFQGFI
PGDNSPQQQSQTKEELNQHMHFSPAHFDSQKSVNFSQHPLHSGTQFSHASNEARSSEGRP
PHALVTFGFGGKLVFMKCNSPFHTNSYGSQDSVGGAINILNLMEVVVEQTNPSNFGWGAH
DYFHALCHQSFPGPLVGGNFGNKELNKWIDEKISECESSHVDYKKGEILRLLFSLLKIAC
QYYGKLRSPFGTHQALKESDCPESAVAKLFAFSKRKSEYGALAHCLQNLPSEAQIQASAR
EVQNLLVSGRKKDALQCAQEGQLWGLALVLSSQLGDQVYGETVKKMALSQFIVGTPLQTL
CLLAAGQPADVFSSATTWSSLPSSVDKPQRPAKIGANCMLDEWEENLAIMTANRTKNDEL
VINHLGDCLWKEHGEATAAHICYLVAEANFEPYTDSARLCLIGADHWKFPRTYASPEAIQ
RTELYEYSKVLGNSQFLLLPFQPYKLIYAHMLAEVGKIADALKYCQAILKSLKTSRAPEV
DTWRQLVLSLEERIRTHQQGGYGTDLAPTKLGKLLTFFDSTAHRVVGGLPPPVPSTSHSS
SQPNELAHQPGGLEVSSSQSTMAMSTLMPSVSMEPISERTGESKTPNRSISEPDFGRSPK
KVDSSQETNSSAMQPKASTSGGSSRFGRFGSQLLQKTVGLVLRSRPDRQAKLGEKNRFYY
DEKLKRWVEEGAEPPIEEAVLPPPPTAGVFQNVMQDYNMKDAAKAEVFPSDARQQTKSLV
SSEQSSEIPPMPCSSNQFTARGRIGVRSRYVDTFNKGGGTSSNFFLSPSIAAAKPGGGSN
PKLFIPSPAASVEGTVQTPEESVQEATMGDENPPSFKEDLFSSQQTSTSSSTSLQRFPSL
DNIVQKRGPMAISNSLFPPPSRRAASWSGSICDARNPSMINEIKPSGEALAVLPALNQPG
DPSSMQFSTDCNSSADDLHEVEL
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttctccattcgaggaggtggatcagacggacgaggatttttttgatagattg
gtcaacgacgaaattgactttactggtttggggccgagtgttctaaagaacgatggtttg
gaggaggcaaaagtgttttctaatctaagcatggcggaagtcggctcggctgctgtagac
tccggaagcaatgctggtttcgaggtgaatggtgaagtggctcgggaagatatggtcgtg
tctgcatcattggtggaagtcaatgaggacaatttggctagtaaggagagcaattcatcg
ataccggaaaatagaaacgagtccaacaatatggttgctaaagagagcatttcattacta
tcgagtaatagaaatggggttagcgaagggggaatagaggaagactgtgcattggatagt
acagtgggtacgaatagtgtggctgcaggagcgggtatgaaagaggttcagtggagttca
tttggctcgaacaatgatgtgggcggtgctggatttggctcgtactcggatttctttagt
gaattgggagatagctcagaagatccatttgccagtgtagcgaatatgggcaagtcaaag
atggaatctaatgttgtgcatgatgttttggaaaacccagttgctaatttgggggcatca
ggttatgaacaacctcacgaaggccaatatcttggagtgggtacggggcagaatttagat
ggtcaggattctagaagtagtgattgttgggaaagtctttatccagggtggaagtatgac
gcaaacacggggcaatggtatcagttggagggtaatgatgcaaatacaaatgcagatatc
aacgtgaatgcaaatgcttatgcaatgggtaatgaggttcttttagaccaagctgcttat
tatcagctgcaagcagctcaggctcaatctgttgctgggactgcagctgaaggatgtact
gctggcagtgtctctcactggaatcagacttcacagggaaatatgcattacccagtgcat
atggtctttgatccccaatatcctgggtggtactatgacacaatcactggagaatggaag
ttgttggaatcgtacattccagcttcaaatcagttaacaagcatagatgataatcagcaa
tttctaaatcagaatgttgagaatcatggatcacaaagtcttgtggaccaggacggttct
gcaatccattacaatcagcaagttttaaatacatggcaaactcaggatgttgctaagagt
gatgctcgtgggtttactgaaaataggaaatcaggggaccattatagttcgattagtcat
ttaacaaattctatggatcaacaatcgcggtttaatccggatggatcccttgctcaattc
gaacaaccaaattggaatgttgatggcagcaataaattttctgggtttcaaggctttatt
cctggtgacaattctcctcagcagcaaagtcagaccaaggaggagctaaatcaacacatg
catttctctcctgctcactttgatagtcagaaatcagtaaatttttcacagcatccgctg
catagtggaactcagttctctcatgcgtccaacgaggccaggtcatctgaaggacggcct
cctcatgctctagttacttttggatttggtggaaaacttgtattcatgaaatgtaatagt
ccctttcacacaaactcctatggaagccaggactccgtaggaggtgcaattaatattctc
aacttgatggaagttgtggtggaacaaactaatccttcaaactttggatggggtgctcat
gattacttccatgccttgtgtcaccaatcttttcctggtcctttggttggtggaaatttt
ggaaataaggagttgaacaaatggattgatgaaaagatttctgaatgtgaatcttcgcat
gtggattacaagaaaggcgaaattctaaggctgcttttttctttgctgaaaatagcgtgt
cagtattatggaaaacttcgatcaccctttggcactcaccaagcgttgaaggaaagtgat
tgtcctgagtcagccgttgctaagctctttgctttttcaaaaagaaaaagcgagtatggt
gcacttgcacactgcttgcagaacttaccttctgaagcacagattcaggccagtgctcgt
gaggtacagaatcttcttgtttctggtaggaagaaagatgctttgcaatgtgcacaagaa
ggtcaattgtggggactagcacttgttctttcctctcagcttggtgatcaggtttatggt
gagactgtaaagaaaatggcacttagccagttcatagtaggaacaccattgcagacgttg
tgcctgcttgctgctgggcagcctgcagatgtgttttctagtgccactacttggagcagc
ttacctagttctgtagataaacctcaacggcctgccaagattggagctaactgcatgcta
gatgaatgggaagagaatttagccatcatgactgcaaacagaacaaaaaatgatgagctt
gttatcaatcatcttggagattgcctgtggaaggagcacggggaggctactgctgcacac
atatgttatttagttgcggaagccaactttgaaccatatacagacagtgcaagactttgt
cttattggtgcagatcattggaaattccctcgtacatatgctagtcctgaggctattcag
aggacagaattatatgagtactcaaaggtgcttggcaattctcagtttctcctcctgccc
tttcagccatataagcttatctatgcgcacatgctggctgaagttggaaaaattgcagat
gctttgaagtactgccaagcaattttgaagtctctaaaaactagtagagcaccagaagtg
gacacgtggagacaattggtattgtctcttgaggagcggattagaacgcaccagcagggt
ggttatggcacagatttggctccaacgaaactgggtaaattgcttaccttctttgatagt
actgctcatcgagttgttggaggccttcctccacctgtaccttcaacatcacacagcagt
tctcaaccaaatgaacttgctcatcaaccaggaggcttggaagtatctagcagtcaatca
acaatggcaatgtctacgttaatgccttccgtttcgatggaacccataagcgaacggact
ggtgagagcaaaactcctaatagaagcatatcggagccagactttggtagatctcctaaa
aaggtggattcatcccaggaaacaaactcttctgccatgcaaccgaaggcatccacatca
ggtgggtcatctcgttttggtcgttttggctcacagctactccaaaagactgtggggttg
gtcttgagatcccgaccagaccgacaggctaaattgggtgagaaaaatagattctattat
gatgaaaagcttaagcgatgggttgaggaaggtgctgaacccccaattgaggaggcagtg
ttacctcctccaccaacagccggagtttttcagaatgtaatgcaagattacaacatgaaa
gatgcagcaaaagctgaagttttcccctcagatgctcggcagcaaactaaaagcctggtc
tcttctgaacagagctcagaaatcccacccatgccatgcagctcaaaccagtttactgca
cgtgggcggattggtgttcgctcaaggtatgttgacacatttaacaagggtggtgggacc
tcatcaaacttcttcctgtcaccttctattgcagctgctaaacctgggggtggttcaaat
cccaagcttttcatccccagtccagcagcttctgttgaagggacagtgcaaacacctgaa
gaaagtgtgcaagaggccaccatgggcgatgaaaatcccccttcatttaaggaggattta
ttctcttctcaacaaacatcaacatcatcatcaacaagtctacagcgttttcctagcctg
gacaatattgtacaaaagagaggaccaatggcaattagcaatagcttatttcctcctccc
tcccgacgtgcggcatcatggagtggaagcatttgtgatgcaagaaatccttcaatgatc
aatgaaataaaaccttcaggagaagcgctagctgtattgccagctttgaatcagcctggt
gatccttcatcgatgcagttttcaacagattgtaatagttctgcagatgatcttcatgaa
gttgaactttga
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