Juglans regia (English walnut): 109016617
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Entry
109016617 CDS
T05245
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jre03000
]
109016617
03036 Chromosome and associated proteins [BR:
jre03036
]
109016617
Transcription factors [BR:
jre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
109016617
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
109016617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
CDC45
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
109016617
NCBI-ProteinID:
XP_018854553
UniProt:
A0A2I4HEF7
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Position
1:386550..396714
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AA seq
643 aa
AA seq
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MTDGHLFNNISLGGRGGTNPGQLKIYSGGILWKKQGGGKAIEVDKADIMGVTWMKVPRTN
QLGVRIKDGLFYKFTGFRDQDVTSLTNFFENTCGITPEEKQLSVSGRNWGEVDLNGNTLS
FLVGSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFREKIMSMADVGAGGEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVDNALSIS
EDLLNTKYKDKLEPSYKGLIHEVFTTILRGLSGSKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIEYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGGFQTTDGVARVLQDEEDDAVDPHLERIKNLAGGDESDE
EDEDFVIDKDDGGSPTDDSGEEESDASESGDEKEKPGKKESRKETSSSKATSSKKKSRDG
DEDASKKKKQKKKKDPNAPKRAMSGFMFFSQMERENVKKSNPGIVFTDVGRVLGDKWKKM
TAEEKEPYEAKARQDQKRYREEISGYKNQQPMNIDSGNESDSS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggccacctcttcaacaatatctctctcggaggccgtggaggcactaatcca
gggcagcttaagatatattcaggagggattttatggaagaaacaaggaggcggtaaggca
attgaggttgataaagctgacatcatgggggtgacatggatgaaggtcccaaggacaaat
caacttggtgtccgaatcaaagacggattattctataagttcactgggttccgagaccag
gatgtcactagtttgaccaatttttttgaaaacacttgtggtataacaccagaggagaag
caactttctgtcagtgggcgtaattggggagaagttgatttaaacggtaatacactgagt
tttttggttggttcaaagcaagcatttgaggtatctctggctgatgtctcgcaaactcag
cttcaagggaaaaatgatgtaatcttagaattccatgtggatgatacaactggagctaac
gagaaagattcattgatggagataagttttcacatacctaattccaacacccaatttgtt
ggtgatgagaatcgtcctcctgctcaggttttccgtgaaaaaatcatgtcaatggcagat
gttggtgctggaggtgaagaagctgtggttacctttgagggcattgcaatcctcacgcca
agggggcgatacaatgttgaacttcatctgtcattcttacgacttcaaggacaggctaat
gatttcaagattcaatacagcagtgttgttcgtctgtttttgcttcctaagtctaaccag
ccacatacatttgttgttgttacccttgatccaccaatccgtaaagggcaaactttgtac
ccacatatagtgttgcagtttgaaactgactatgtagtggataacgccctgtcaataagt
gaagatcttttgaacaccaaatataaagacaagttagaaccatcttataagggactcatt
catgaagtgttcaccacaatattgcgtggcttgtctggttccaaagttactaaaccagga
aaattccgtagctgtcaagatggttatgcggtgaagtcatcattgaaggctgaagatgga
gtcctgtatccacttgaaaagagtttcttctttctaccgaaacctcctacacttattctt
catgaagagatcgagtatgtggaattcgagaggcatgctgctggtggctcaaatatgcat
tactttgatcttcttataagactgaaaaccgagcaagaacatctttttcgtaacatccag
aggaacgaataccataatctttttgacttcatcagtgggaagggcttgaaaattatgaac
ctgggaggtttccaaactacagatggcgtagcacgtgttcttcaggatgaagaagatgat
gctgttgatccacatctggagcgcattaagaatctagctggtggagatgagagtgatgaa
gaggatgaagattttgttattgacaaagatgatggtggttctccaactgatgattctgga
gaggaggaatctgatgctagcgaaagtggagatgagaaagagaagcctgggaaaaaggaa
tccagaaaagagacttcgtcttccaaggcaacttcttctaagaagaaatctagagatgga
gatgaagatgcttcaaagaagaaaaaacagaaaaagaagaaggatccaaatgcaccaaag
agggcaatgtctggtttcatgtttttctcacaaatggaaagagagaatgtcaagaaaagc
aaccctggtattgtgtttacggatgtggggagagtacttggagataagtggaaaaagatg
acagcggaggagaaagaaccatatgaagcaaaggctcgtcaagaccaaaaacgttacagg
gaggaaattagtggctacaagaaccagcaaccgatgaatatagattctgggaatgaatct
gacagctcatag
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