Juglans regia (English walnut): 109018855
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Entry
109018855 CDS
T05245
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109018855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109018855
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109018855
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109018855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
109018855
NCBI-ProteinID:
XP_018856592
UniProt:
A0A2I4HKH8
A0A833XJB7
LinkDB
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Position
7:complement(47032330..47033898)
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AA seq
274 aa
AA seq
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MPLLPKSETIQIREVWADNLESEFSLIREIVDDFPYVAMDTEFPGIVLRPVGNFGSSYEY
HYQTLKANVDVLKLIQLGLTFSDERGNLPTCGTGQHFIWQFNFREFDPNSDVFANESIEL
LRQSDIDFRKNNERGVDAVRFGELLMSSGVVLNNSVHWVTFHSGYDFGYLLKLLTCQNLP
DTQVEFFNLINTYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS
CAFRKLKENFFSGSLEKYAGVLYGLGVDNGQSTN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgttacccaagagcgagacgatccagatccgcgaggtgtgggccgataatctc
gaatcggagttttccctgatccgagagatcgtcgacgacttcccgtatgttgcgatggac
acagagttccccgggatcgttctacggcccgtcgggaacttcgggtccagctacgaatac
cattaccagaccctaaaagccaacgtggatgtgctcaagctgatccagctggggctcacc
ttctccgacgagcgaggcaacctccccacctgcgggaccgggcagcacttcatctggcag
ttcaattttcgcgagttcgatcccaactcggacgtcttcgccaacgagtcgatcgagctc
ctgcgccagagtgacatagatttccggaagaacaacgagagaggcgtcgatgcggtgcgc
ttcggggagttgctcatgtcctctggtgtcgttttgaacaacagcgtccactgggtgacc
ttccacagcggctacgacttcgggtacttgctcaagcttctgacgtgtcagaatctaccg
gatacccaggtggagttctttaatttgatcaacacgtattttccgacggtgtatgatatc
aagcatttgatgaagttttgcaatagtttgcacggtgggttgaacaagttggcggaattg
ttggaggtggagcgagttggggtttgtcaccaggctgggtcagatagtttgctcacgtcg
tgtgccttcaggaagttgaaggaaaatttctttagtggctcgttggagaagtatgccggc
gtgctgtacggtttaggtgttgacaatggacagagtacaaattga
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