Juglans regia (English walnut): 109018987
Help
Entry
109018987 CDS
T05245
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 13 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
jre
Juglans regia (English walnut)
Pathway
jre04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
109018987
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
jre04040
]
109018987
Ion channels [BR:
jre04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109018987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
DUF2985
Motif
Other DBs
NCBI-GeneID:
109018987
NCBI-ProteinID:
XP_035547545
UniProt:
A0A6P9EGY8
LinkDB
All DBs
Position
7:complement(6747220..6752807)
Genome browser
AA seq
778 aa
AA seq
DB search
MDSRRNSFVRFQSWSSENSMNDGKYSRNSSRPTFGRIFESFRRGFVRVSGTIKSLKNNTI
SIPSVYDQPRNDDQSGPRTMRVHDPQDQFLQRWNKLFVLSCAISLALDPLFFYIPVLKLN
DEETCLYTDRTLAIIVCVLRSVTDAFYAIHIYFQFRTGIVLPSSRVFGTGQLIIDPMTIA
KRYLSTYFTVDVLGILPLPQVVVFVISPSFKNAVPIVGKEMLKYVIFSQYVPRLLRIYPL
YVEVIRSSGRLTKTAWGGAAYNFFIYMLASHVIGAFWYFFGIERQDACWQKMCRKINGCR
DKYFYCGNKLDQADFVGLVSQACRIVEPDETKNSTDHFDYGIFTGVLKSGVVESRNFRVK
FSYCFWWGFRSLSSIGQNLETSTFFWEIVFVVCIAISGLVLFLVLIGNMQIYLQSTTVRR
VQELRVRKTDTEQWMSRCMLPNDLRERVRRYEKHKWLQIRGVEEENLIRNLPKDLRRDIK
RHLCLDLLLKVPLFNEIDQQLRDPMLDRLKTVLYTKNTYLIREGDPVDEMIFIVRGTLTT
FTTNGGTTGFFNTSDLKSGDFCGEEVLAWALLSLSSTAFPISTRTVVARTEVEAFILMAE
DLRSMASQFPKLHSRELQHAFRFYSQQWRTWAACFIQSAWRRFLKRKHERASCDAENRLQ
YALANEAGTSESLGATKERTKGAGNTRVLQLLPSKLVEPNFNVEGDNTAQEPSTHAVVTG
PATTQTSICNPPNMAEICAALEEHRVGMERIIMLVMNRLTDMEGRMAAIEEVLRTRSL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggattcccggcgaaatagttttgtaaggtttcaaagttggagttcggagaattccatg
aacgatggcaaatactcaagaaacagttctagacccacatttggcagaatttttgagagt
tttcggagaggatttgtgagagtgtctgggacaattaaaagtttgaaaaacaacacaata
agcatcccttctgtatatgatcagccacgaaatgatgatcagtcaggtcctaggacgatg
agagtccatgatccgcaggatcaatttcttcaaaggtggaacaaactatttgtactttct
tgtgcgatatcattggcattggacccactattcttttacatcccagtgttgaagttaaat
gacgaggagacatgcttatatacggacagaacactggcgattattgtttgtgttcttcgt
tcggtcacagatgctttttatgcaattcatatatactttcaatttcgaacagggattgtc
ctaccttcttcccgagtgtttggaacgggtcagttgattatcgatcctatgacaatagca
aaaagatacttgtccacatatttcactgtcgacgttctaggaatccttccattaccacag
gtggtagttttcgttatctctccttcattcaaaaatgcagttccaattgtggggaaggaa
atgttgaagtacgtaatcttctcccaatatgtgccgaggcttttgcggatttatccacta
tatgtagaagtaattagaagctctggcagactaactaagacagcatggggtggagctgct
tataactttttcatctacatgcttgccagtcatgtaattggagcgttttggtactttttt
ggcattgaacgacaggatgcgtgctggcagaaaatgtgtaggaaaattaacggttgtcga
gataaatatttttactgtggaaataaacttgaccaagctgactttgttggtctagtaagt
caggcttgccgtattgtcgaaccagatgaaactaaaaactcaactgatcattttgactat
ggaatatttactggagttttgaagtctggggttgtggaatcaagaaacttcagagtaaaa
ttttcttattgcttctggtggggttttcgcagtctgagttctataggccaaaatctggaa
acaagcacctttttttgggaaatagtctttgttgtttgcatagccatctctgggttggtc
ttattcttagtacttattggcaatatgcagatatatctgcaatctacaacagtgaggaga
gtacaagaactgagggtgaggaagactgatacagaacaatggatgtcccgatgtatgctc
cctaacgacttaagggagcgggttagacgatatgaaaagcacaaatggctacaaataaga
ggtgtggaggaagagaatctcatccgtaatcttcccaaggatcttagaagggacataaag
cgccatctttgcttggatcttcttctaaaggttcccctgttcaatgagatcgatcaacaa
ctgcgggatccgatgttggaccgtctcaagacagtgctttacacaaagaacacctacctt
attcgtgaaggggatccggtagatgagatgatctttatcgtgcgaggaactctaaccact
tttactaccaatggtggaacaactggttttttcaacactagtgatcttaaatctggtgac
ttttgtggtgaagaggttcttgcttgggccttactttccctgtcctcgaccgcattcccc
atttcaactagaacagtggtggctagaacagaggttgaagccttcattctaatggcagaa
gacttgaggtctatggcctctcagtttccgaaacttcatagcagggaattacagcacgct
ttcaggttctactcccaacaatggaggacatgggcggcctgttttatccaatcagcttgg
cgccgtttccttaagagaaaacatgagagggcttcgtgtgatgcagaaaatagattgcaa
tatgctttggcaaatgaagctgggacgtcagaaagtcttggtgcaactaaggaacgaacg
aaaggtgcaggcaataccagagtgctacaactgctgccatcgaagcttgttgagcccaat
ttcaacgttgaaggtgacaatactgcacaggagccgtctactcatgcggttgttacgggg
cctgctactacacagacatcaatatgtaatcctcccaacatggcagaaatttgtgcagca
cttgaagagcatcgtgtgggtatggagaggatcattatgctcgtcatgaatcgactgaca
gacatggagggtcgtatggctgctatagaggaggtccttaggactcgaagtctttag
DBGET
integrated database retrieval system
