Juglans regia (English walnut): 109019371
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Entry
109019371 CDS
T05245
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109019371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109019371
03036 Chromosome and associated proteins [BR:
jre03036
]
109019371
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109019371
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109019371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
109019371
NCBI-ProteinID:
XP_018857198
UniProt:
A0A2I4HM13
LinkDB
All DBs
Position
7:46954861..46961032
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AA seq
1070 aa
AA seq
DB search
MASPSLLPVSGISSELQSRRNVSFSSSCEVDSDVGTSSEVVSHYKKRRTSQNNDFSSCGI
LSEVEAILPTLRSADYYMRPCLKELATWELEDPGYCSRVLDFTIGRVGYGSVKFLGKTDI
RWLDLDDILKFHRHEIVVYEDENAKPGVGQGLNKAAEVTLVLQVRSLGFEEGKLEMIVDK
LRIIAERQGACFISFDPANGEWKFLVQHFSRFGLNEDDEEDIVMDDATVVQNPMGMNGGE
AADIDEETHMGATSVVLSHSLPAHLGLDPVRMREMKMLMFPDEEEEAEDTSEIPTYQKPS
FGKDSVRSPFRNSAQMMSHRSSPPVARKAPLPLLEYDHGSFDSNSPGAILMAQQNKGLSL
RPLKPEGSGFKLDLKKETPVTGSHSRNIVDAGLFMGRSFRVGWGPNGILVHTGTPVGSND
SQRVLSSVITLAKVATDEVVRDENNKVREELVDLAFDSPLNLHKEISHETKEVEVGSFKL
RLRKLVSDRLMLSEICRSYGDIIERRLEVPGLSSSSRVVLSHQVMVWELIKVLFSDRENI
SQLKSLVADNEEDMMQDMKEASSDVDIEALPLIRRAEFSLWLQESVCPRVQDTISSLNES
SYLEHVFLLLTGRQLDAAVELAASTGDVRLACLLSQAGGSMVNRADVAQQLDLWRINRLD
FSFIEEDRLRLYELLAGNIHGSLHGMKVDWKRFLGLLMWYQQPPDTSLPVVFHTYQHLVD
DGKAPYPVPVYIDEGPVEEAVKWSKEERFDFSYYLMLLHASGEGEFDLLKAMFTALSSTN
DPLDYHMIWHQRAVLEAIGAITSNDLHVLDMGLVSQLLCLGKCHWAIYVVLHMPYREDFP
YLHASLIREILFQYCECWSSDESQRQFIENLGVPVVWLHEAMAIYCGYYGDFSNALENFL
QCEHWQKAHTILITTVAHKLFLSAKHSEIWRLATCMEDHKSEIENWDLGAGIYISFYLLR
SSLQEDNNAMSELDSLESKNAACRDFLGRLNESLQVFSGRLQVDARVAYSKMAEEICGLL
LSDIGEGSTYDGQLSCFDTVFRAPIPEDLRSSYLQGAVSVFTCFLSEVPS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccttctctgctcccggtttccgggatttccagtgaacttcagagtagaaga
aacgtatcatttagtagttcttgtgaagtggactctgatgtgggaactagttcagaagtt
gtatctcattacaagaaaaggaggacatctcaaaacaatgatttttcttcgtgcgggatt
ttgagtgaggttgaagctatcttacctactttaaggtcagctgattattacatgagaccc
tgtttgaaggaattggctacctgggaacttgaggaccctggttattgtagccgagttttg
gacttcacaattgggagggtgggttatggatcggtcaagtttcttgggaagactgacatt
agatggttggatctagatgacattttgaagttccataggcatgagatagttgtttatgaa
gatgaaaatgctaagcctggagttggacagggacttaacaaggctgctgaggtgactctg
gtgctacaagtgagatctctgggttttgaagagggaaaactagagatgatagtggacaaa
ttaagaatcattgcagaaagacagggggcttgcttcatttcctttgacccagcaaatggt
gaatggaaattcttggttcaacatttcagcagatttggattgaatgaagatgatgaggaa
gatattgtaatggatgatgcaactgtagttcagaatcccatgggtatgaatggtggtgag
gctgctgatattgatgaagaaacacacatgggagctactagtgttgtgctctctcactct
cttcctgcccatcttgggcttgaccctgtaagaatgagagagatgaaaatgttaatgttt
cctgatgaggaagaggaggcagaggataccagtgaaataccaacataccagaagccatcc
tttggtaaagatagcgtaagatctcccttccgcaactctgctcaaatgatgagccataga
tctagtccacccgttgctcgaaaagccccattaccgttgctcgagtacgaccatggtagt
tttgactcaaactcacctggagccattctgatggcccaacaaaataagggtctgtctctg
aggcctttaaaacctgaaggttcaggttttaagctggacctcaagaaagaaacaccagta
actggaagccattctcgcaacatagtggatgcaggcttgttcatgggtaggtcatttcgg
gttgggtggggcccaaatgggattcttgttcacactgggacaccagtaggcagtaacgat
tctcagagggtgttatcatctgtcatcactttagcaaaggttgctacagatgaagtggtt
agagatgaaaataacaaggtcagagaagaacttgttgaccttgcatttgattctccatta
aatctccacaaggagataagtcatgaaacaaaagaagttgaagttggttccttcaagctg
agacttcggaaacttgtctcagatcgcttaatgctttcagagatttgtaggagttatgga
gatattattgagaggaggttggaagttcctgggctatcttcctctagtcgtgtggttttg
tctcatcaagtaatggtgtgggaattgataaaagttcttttttctgatagggaaaatatt
tcacagttgaagtccttggttgctgacaatgaggaagacatgatgcaggatatgaaggaa
gcttcttcagatgtagacatagaagcacttcctcttattcgaagggcagagttcagctta
tggttgcaagagagtgtctgtcctcgggtacaagatacaataagctccttgaatgaatca
agttatctggaacatgtattcttactcttgacggggcgacagcttgatgcagctgtggag
cttgctgcttctactggggatgtgagactggcttgcttattaagccaggctggtgggtcg
atggtgaatcgtgctgatgttgcacagcaacttgatctttggagaatcaatagactggat
ttcagtttcattgaggaggaccggttaaggctttatgaattgcttgctggtaatattcat
ggttctttgcatggtatgaaagttgattggaagcgatttctaggtttattgatgtggtat
caacaaccacctgacacttccttgcccgttgttttccacacttatcaacatcttgttgat
gatggaaaagctccatatcctgttccagtatacattgatgaaggaccagtagaagaggct
gttaaatggagtaaagaggaacgttttgacttctcgtattatcttatgcttcttcatgca
agtggagagggagagtttgaccttttgaaggcaatgttcactgcattatcttcaacaaac
gatccacttgattaccatatgatttggcatcagcgtgcagtgttggaggcaattggtgct
atcacttctaatgatcttcatgttcttgacatgggacttgtctcgcagctgttatgtctt
gggaaatgtcattgggccatctatgtggtccttcatatgccctaccgtgaagattttcca
tatctacatgcaagtctcattcgagaaatcttgttccagtactgtgaatgttggagttca
gatgagtcgcaacgccagtttattgaaaacttgggggttccagtcgtgtggcttcatgag
gctatggctatttactgtggttactatggagatttctcaaacgcacttgagaactttctt
caatgtgaacattggcaaaaagctcatactattttgataacaacggttgctcataaattg
ttcttgtcagccaaacactcggagatatggaggcttgctacctgtatggaggaccataag
tcagaaattgagaattgggacttgggagctggaatttatatttcattttatctattgaga
agttcactgcaagaagataacaatgctatgagtgaactggattctcttgagagcaaaaat
gctgcttgtagagactttctgggtcggttaaatgagtctctacaagttttcagtggtaga
ttacaagttgatgcaagggtagcttattcaaaaatggcagaggagatatgtggcttgctt
ctttctgacattggtgaaggctcaacatacgatggtcagttaagctgctttgacactgtt
tttagagctccgatccctgaagaccttcgctcaagttatttgcagggtgcagtgtctgtt
tttacatgctttctttcggaggtgccttcatag
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