KEGG   Juglans regia (English walnut): 109019372
Entry
109019372         CDS       T05245                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
jre  Juglans regia (English walnut)
Pathway
jre03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109019372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jre03019]
    109019372
   03036 Chromosome and associated proteins [BR:jre03036]
    109019372
Messenger RNA biogenesis [BR:jre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109019372
Chromosome and associated proteins [BR:jre03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109019372
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_IFT122_1st WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_Nup120_160 Beta-prop_BBS7
Other DBs
NCBI-GeneID: 109019372
NCBI-ProteinID: XP_018857199
UniProt: A0A2I4HM06 A0A833XIQ6
LinkDB
Position
7:complement(46946336..46954786)
AA seq 347 aa
MSAFGTPTAPNPNPNKSFEVAQPPSDSVSSLSFSPKANYLVATSWDNQVRCWEIMHSGAV
VGSTPKASISHDQPVLCSTWKDDGTTVFSGGCDKQAKMWPLSGGQPMTVAMHDAPIKEIA
WIPEMNLLVTGSWDKTLKYWDTRQSNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIVFN
LQNPQTEFKRITSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCHR
DGNEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMARCSQPIPCSTFNNDGS
LFAYSACYDWSKGAENHNPATAKSHIFLHLPQESEVKSKPRAATGRK
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgtctgctttcggaacccctacggccccgaaccctaatccgaataaatcctttgaggtg
gctcaacctcccagcgattcagtttcaagccttagttttagccccaaggccaattacctg
gttgctacttcgtgggataaccaggtaagatgttgggagataatgcatagtggggctgtt
gtaggcagtacacctaaggcttcaatatctcatgaccaaccggtgttgtgctcgacttgg
aaagatgacggaacaactgtattttccggaggttgtgataagcaagctaaaatgtggcct
ttgtctggtgggcagccaatgactgtggccatgcatgatgcacctatcaaagagattgcg
tggatcccagagatgaacctcttagttacaggaagttgggacaagaccctcaagtattgg
gatactagacagtcaaatccagtgcatactcaacaactccctgatcgttgttatgcgctg
acagtgaggcatcctttgatggttgttggcactgcagatcgaaatctgatagtcttcaac
ttgcagaacccccagaccgagttcaagagaatcacttcacctttaaagtatcagacaaga
tgcgtcactgccttccctgatcagcaaggtttcttggttggctcaatagagggaagggtt
ggtgtgcaccaccttgacgattcacagcaaagtaaaaacttcacttttaaatgccaccgg
gatggcaatgagatatactctgtcaactctctaaacttccaccctgtgcatcacactttt
gcaactgcagggtctgatggtgcttttaacttctgggacaaagacagcaagcagagactc
aaggccatggctaggtgcagtcaaccaataccatgcagtacattcaacaacgatggttca
ctcttcgcctactcagcatgctacgactggagtaagggtgccgagaatcacaatccagca
actgcaaagtcccacattttcctgcatctgccacaggagtctgaggttaaaagcaagcca
cgcgctgcaactggtagaaagtga

DBGET integrated database retrieval system