Juglans regia (English walnut): 109019374
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Entry
109019374 CDS
T05245
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1-like
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jre03016
]
109019374
Enzymes [BR:
jre01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
109019374
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
109019374
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
DNA_processg_A
Motif
Other DBs
NCBI-GeneID:
109019374
NCBI-ProteinID:
XP_035546299
UniProt:
A0A6P9EDI3
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Position
5:complement(9905686..9916835)
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AA seq
300 aa
AA seq
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MEPRWKGKGFKAKALAEPISKIVSQLRSSLIQSDAHGLLVGCSVLIAAEAEQIDLLDRAC
FGNRNTTAEKGKEWFQLGLEEAFYLCYSLKCLTIVSDDHCPKNDVELWQCMISKKSAFPD
FYKAYAHLRMKNWVVKSGSTYGVDFVAYRHHPSLVHSEYAVLVLSEGEDEVNGRLRLWSD
LHCATRLSGSVVKTLLVLKINKNGNGAASPSSLEKYTVVERTITRWRPEQCRENPMIDEK
ITKQREALGKAATLKTKFITKHDVKLKKGVVGIASSLIVVSVSLTLVLISIMVSRRFCLN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagccaagatggaaaggaaagggcttcaaggctaaagctcttgcagagcccatttca
aagattgtatcccaattgcggtcatctctaattcaatcagatgctcacggattgctcgtt
gggtgcagtgtactaatagcagcagaagcagaacaaattgatcttctcgatcgtgcatgc
tttggtaaccgcaatactacagctgaaaagggcaaggagtggtttcagctgggtttggaa
gaagctttttacctatgctattcattgaaatgcctcacaattgtgagtgacgatcattgt
ccaaagaatgatgtagagctatggcagtgcatgatatcaaaaaaatcagctttccctgat
ttctacaaggcttatgcgcatcttcgaatgaaaaattgggtcgttaagtctggttccact
tatggtgtggactttgttgcctatcggcaccatccctctctggtccattctgaatatgct
gtgcttgttttgtccgaaggagaggatgaggtaaatggccgattgaggttgtggtctgat
cttcattgcgcaactcgacttagcggaagcgttgtgaagacgcttttagttctgaagatc
aataaaaatggcaatggtgctgcctctccatcatctttggagaaatacaccgtcgtagag
cgcacaatcacaaggtggcgtcctgaacaatgccgtgaaaatcctatgatagacgaaaag
attaccaagcaacgagaagctcttggaaaagcagcaactttgaagacgaaatttatcaca
aaacatgatgtaaaattgaagaagggcgtagttggaatcgcaagcagtcttattgtagtt
agtgttagtcttactttagttcttatttccattatggtaagccgtcggttttgtttaaat
taa
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