Juglans regia (English walnut): 109019483
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Entry
109019483 CDS
T05245
Name
(RefSeq) WD repeat-containing protein 76
KO
K24755
WD repeat-containing protein 76
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jre04121
]
109019483
03036 Chromosome and associated proteins [BR:
jre03036
]
109019483
03400 DNA repair and recombination proteins [BR:
jre03400
]
109019483
Ubiquitin system [BR:
jre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109019483
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109019483
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
109019483
DSBR (double strand breaks repair)
Other DSBR factors
Others
109019483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
109019483
NCBI-ProteinID:
XP_018857316
UniProt:
A0A2I4HMD0
LinkDB
All DBs
Position
6:37729902..37733484
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AA seq
479 aa
AA seq
DB search
MESSQQLTEYELKRLDNIRRNDQLMASLKIHSKVAELSAASKRQRVGIKSYKVSPEKKPK
TETPIVIRRSLRTRGMPPDYSDSKGLGDIVEAADKVSKSPTSSKPSPRALGPLSVRDAYR
GTGSDKLLIERIMEGSKKENKIFGDKNGGDLMEGVSESGSCLELESLSLNPENIARVVPG
KILNVRFFPCSDRRIIVVGNKFGNVGFWDVDSGAHEEDGVYLYHPHPGPVSGISIHKHSL
PKIFTSCYDGFIRLMDAEKEVFDLVYSTDGTIYSLSQRSDDVKCLYFSEGPGGLNIWDER
VGKCSAQWNLHESRINTIDFNSENFMATSSSDGTACIWDLRNIGADKPKYLKEVRHKRAV
QSAYFSPSGCSLATTSMDDTVGILSGANFDDNSMIKHYNQTGRWISSFRAIWGWDDSYVF
IGNMKRGVDVISPAQRRTIFTLQSPHMSAIPCRFDAHPYNVGVLAGATSGGQVYMLTSD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtctcagcaacttacagagtatgagctcaagcgcctcgataatattcgccgg
aacgatcaactgatggcttcccttaaaatccactccaaggtcgccgagctctccgctgct
tccaagcgccaaagagttggaatcaaatcatacaaagtgagtccggagaagaaacccaaa
accgagactccaatcgttatccgacggtccttgcgtacgcgtgggatgccgcctgattac
tctgactccaaaggtcttggcgatattgttgaagcagccgataaggtttccaaatctccg
acctcgtcgaagccttcgccgcgcgccttgggccctcttagcgtgagagatgcgtatcgt
ggaaccgggtctgataaattactgattgaaagaattatggaaggttcaaagaaagaaaat
aagatatttggtgataaaaatggtggggatttgatggagggtgtgagtgaaagtgggagt
tgtttggaactggaatccttgagtctgaatccggagaatatcgcccgagtcgtgccgggg
aagatattaaatgtacggttttttccttgtagcgacagaagaatcattgtggtggggaat
aagtttgggaatgttgggttttgggatgttgattctggtgcacacgaagaagatggtgtt
tatttgtatcacccgcatccaggtccagtctcggggatttcgattcacaaacatagtttg
ccaaagatctttaccagttgttatgatggatttatccgactaatggatgctgagaaggag
gtatttgatctggtatattctactgatggtaccatatattctctatctcaaagatcagac
gatgtgaagtgtttgtattttagtgagggtcctggaggtttgaatatttgggatgagagg
gttgggaaatgctcagcccaatggaatttgcatgaaagtaggattaacaccatagatttt
aactcggaaaactttatggctactagttcctcagatggaactgcctgtatatgggatttg
cgaaatattggtgcagataagcccaaatatctgaaggaagtaaggcataaaagggctgtg
cagtctgcttatttctcaccctctggatgctccctagcgacaacaagcatggatgacaca
gttggtatactgagtggagctaatttcgatgataattcaatgattaaacattataaccag
acgggcagatggatttcttctttcagagcaatatggggatgggatgattcatatgtcttc
atcggcaacatgaaaagaggagttgatgttatctccccagctcagagaagaacaatattc
actttacaaagcccacacatgtcagcaattccatgcaggtttgatgcacacccttacaat
gttggggtgcttgcaggagccacaagtggaggtcaggtttatatgttgacatcggactaa
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