Juglans regia (English walnut): 109020159
Help
Entry
109020159 CDS
T05245
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
jre
Juglans regia (English walnut)
Pathway
jre04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
109020159
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
jre04040
]
109020159
Ion channels [BR:
jre04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109020159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
PPDK_N
Motif
Other DBs
NCBI-GeneID:
109020159
NCBI-ProteinID:
XP_035543453
UniProt:
A0A6P9E7L1
LinkDB
All DBs
Position
2:6967930..6977517
Genome browser
AA seq
624 aa
AA seq
DB search
MRQRSLTWQENETPYVDIEAQIPENGETEADSEEKKTATKRDSNPVRWLIRKCNIDPQGR
FIRTWDLIFLLSCLIAVSVDPLFFYLPVINEDRTCLTLDNRLKITATCLRSVLDFISLSD
IILRFICPFTNEDSPDQQHGQTNLVKDAWPIAKRYLFSRYFLIDILAILPAPQVAVPIIF
SDMGSQTYWKIFLGTVVLFQYVPRVLRIFRVWSKVDKSTTIFKAVSWLNAGNYFYLYLFA
SYVLGAFWYFLSIQRLMDCWHVACKRNKGCNPSSFFCDHDDGNHIFKKEWCPVKTPDSTA
FDFGIFREALQSVKASPFLQKCLFCSCWGVRNLSSLGQNLQTSPYEWENVFAIFVTILGL
LLCLYFIGNVQMYMHLKKNRKLELTYMDKDDKARMKAKEKKAEEWISKNQLPDHMKKEIM
SCIRQKLGKKEDIDTENPFPHLPKHLSTEIRRHLCLPQLKKVPMFQEKSEKQLHLICDEL
KQVYYNEDSYIVRQGEPLDRMLFLTQGYALKFRSGETALRRSIGKGDFIGEQLLTWGFNG
SSAPNLSELPISTETIKTHNKVEAFALLANVLRTLVPKVQEVDTVKSEAVQKNTPVEGNL
ESYYTALQRHEHLRSEIEEGDLVD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaacgcagtctgacttggcaagagaatgagacgccgtacgtggatattgaggca
caaatacccgagaatggagaaactgaagccgattcagaagaaaagaaaacagccacaaaa
agggatagtaacccagtgaggtggctcattcggaagtgtaatatcgacccacaagggagg
ttcattcgaacttgggatttgatatttctcctatcttgtctgattgcagtatcagtggac
cctttgttcttttaccttcctgtgatcaatgaagacagaacgtgccttactttagataac
agattaaagatcacagctacttgtttgcgatcggttctggacttcatctctctttcagat
attattttgcgatttatttgtccttttacaaacgaggattctcctgatcaacaacatgga
caaacaaatttagttaaagatgcttggccaatagcaaagaggtacttgttttcccgatac
ttcctaattgacattctcgctattcttccagctccacaggtggcagttccaattatattt
tcagatatgggaagtcagacatattggaaaatattcctgggcactgtcgttctctttcag
tatgtgccgagagttttacgaatcttccgagtatggagtaaggttgacaagagtaccacc
atatttaaagctgtatcatggttgaatgctggaaattatttttatctgtacctctttgcc
agttatgtgttgggtgcattttggtactttttatccattcaacgactgatggattgctgg
cacgtagcctgtaaacgtaataagggatgcaacccaagttcttttttctgtgaccacgat
gatggaaatcacatatttaaaaaggaatggtgccctgtaaaaacaccagattcaacagcc
tttgactttggaatattccgtgaagcccttcaatccgtaaaagcgtcaccttttcttcaa
aagtgtctgttctgttcatgttggggcgttcgaaatttgagttctcttggtcaaaacctt
cagacaagtccttatgaatgggaaaacgtttttgcaatttttgttacaatcttgggcttg
cttctgtgtttgtacttcattggaaatgtgcagatgtatatgcatttgaagaaaaatagg
aagttggagctcacttatatggataaggatgataaagcaaggatgaaagctaaagaaaag
aaggcagaggaatggatctctaaaaaccaacttcctgatcatatgaagaaagagatcatg
tcctgtataagacaaaaactgggaaaaaaggaagatattgatactgagaatccattccct
catcttcccaaacatcttagtacagagattaggcgccatctttgcttgccccagctaaag
aaagtgccaatgtttcaagaaaaaagtgaaaagcagttgcatttaatctgcgacgagctc
aaacaagtgtactacaatgaggatagctatattgttcggcagggagaaccccttgaccgg
atgctcttcctgacacaaggatatgcgttgaaattcagaagtggggaaacagctttgagg
aggagcattgggaaaggtgacttcattggagaacaacttctaacatggggttttaatggc
tcctccgcacccaacctatctgagctcccaatatctacagaaacaatcaaaacccataac
aaagttgaagcctttgctctattggccaacgtcttgaggactctagttcccaaggtgcag
gaagtagatactgttaaaagcgaagctgtccaaaaaaacactccagttgaaggtaatctt
gaaagttattacacggcacttcagaggcatgaacacttgagaagtgaaatcgaagaaggg
gatttggtagattag
DBGET
integrated database retrieval system
