Juglans regia (English walnut): 109020445
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Entry
109020445 CDS
T05245
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jre03009
]
109020445
Enzymes [BR:
jre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
109020445
Ribosome biogenesis [BR:
jre03009
]
Eukaryotic type
Other ribosome biogenesis factors
109020445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Methyltransf_31
PCMT
Ubie_methyltran
RrnaAD
FtsJ
Cons_hypoth95
Methyltransf_4
RsmF-B_ferredox
ASPP2-like_RA
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
109020445
NCBI-ProteinID:
XP_018858449
UniProt:
A0A2I4HQM5
A0A833T9I9
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Position
15:10297430..10332434
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AA seq
513 aa
AA seq
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MVRDKKMKPVRATSTLGPVDKLEIKRLSNAERSAYFSRREAAKVLRSVLEGDARRRAVGS
IKSLVFRPSIRNKKGTFALVCQTLKHLVIIKDVLEASSILKGKWKRQAELIYIITYDILF
GQAVSLVGDAEKFLMQWKDDLQLALARLLVKEKVKTVEDLVNLYQIPEVSKPRYVRVNTL
KIDVDSALLELGRQNMVQKDDVVPDLLILPPATDLHNHPLVMNGSVFLQGKASSMVATAL
DPKPGWEVLDACSAPGNKTAHLAALMRGKGKIIACELNKERVKRLKETIKLSGASNIKVL
NGDFLNINPKDPSVSTIRAILLDPSCSGSGTVSVRLDNLLPSYAAADVKDTERLNKLAAF
QKKALAHALSFPAAERVVYSTCSIHQIENEDVIESVLPLAASYGFQLATPFPQWQRRGLP
VFQGSQHLLRTDPAEDGEGFFIALFTKEDNINHFEKQAICNTSEALSRDNCSDRLLDRKK
RCVIPYVGTRLFQIWLHAKQDWPQKKQKHFQSK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgataagaagatgaaacctgtaagagcaacatcgactttgggaccggtggat
aaactggaaatcaagcgtttgagcaacgcggagcggtcggcttacttctcaaggagagag
gcagcgaaggtgttacggagcgttctggaaggcgatgcccgtcgccgtgccgtcggctcc
atcaaatcgctagttttccggccatctatcaggaacaagaagggcacttttgctctggtc
tgtcaaacgctcaagcaccttgttattataaaggatgtcttggaggcttctagcattctg
aaaggcaagtggaagaggcaagcggaattgatttacattatcacatatgacattcttttt
ggccaggcggtttcactagttggggatgctgagaagtttctgatgcaatggaaagatgat
ctacagttagctctagcacggctgttagttaaggaaaaagtgaagaccgttgaagacttg
gtgaatctttatcaaattcccgaagtttcaaaacctcgttatgttcgtgtaaatactctg
aaaattgatgttgattctgccttacttgaattagggcgacaaaacatggttcaaaaggat
gatgtggttcctgacttgttgatactcccaccagctactgacttgcataatcatcctctg
gtcatgaacggaagtgtctttttacaagggaaggcaagttccatggtggccacagctctt
gatcctaaaccaggatgggaggttctcgatgcatgctcagccccaggaaacaaaaccgcc
caccttgctgctcttatgcgaggaaaggggaagattatagcatgtgagctgaataaggag
agggttaaacgtctaaaagagactatcaaactttctggtgcctctaatataaaagttctg
aatggagatttcttgaacatcaacccaaaggatccatcggtctcgacgatccgtgccatt
cttttagatccttcatgctctggctctgggacagtctctgtgagattggacaatctgctc
ccatcttatgctgcagctgatgttaaggacactgaaagattgaacaagcttgcggctttc
cagaaaaaagctctcgctcatgcattatcttttccagcagctgaaagagtggtgtacagc
acatgttccattcaccaaattgaaaatgaagatgtcatcgaatctgttctcccccttgct
gcctcctatggctttcaactagcaactcccttcccccagtggcaacgccgtggtctccca
gtttttcaaggctcacaacatttactgcgaactgaccctgctgaggatggagaaggcttc
ttcattgctttgtttaccaaggaggacaacattaatcactttgaaaagcaagcaatttgc
aacacttctgaagctctttccagggataactgcagtgatcgattactcgacaggaagaaa
agatgtgtgataccttatgtcggtactagattgtttcagatatggttgcatgcaaaacag
gattggccccaaaagaaacagaaacattttcaaagcaagtga
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