Juglans regia (English walnut): 109020539
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Entry
109020539 CDS
T05245
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
jre04131
]
109020539
Membrane trafficking [BR:
jre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109020539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
109020539
NCBI-ProteinID:
XP_018858563
UniProt:
A0A2I4HQY6
LinkDB
All DBs
Position
2:19153760..19162750
Genome browser
AA seq
1437 aa
AA seq
DB search
MASNPPFQVEDQTDEDFFDKLVGDEFGPTTTGSNPQFTDGNDSDDAKAFSNLNIAEAGNA
FGDLGGGGDDSILESEAKTEKDRVDGAAKSLGAHAEERNSLVSSNSVGCDSIVESSNDGI
GSEFTSDSTMSKSSGSGGSGVKEVGWNSFHAGLEQNSSKGFGSYSDFFNDLGGDSGTFQG
DVGDNLTSQAKTVSAHEEFGANGTNNSVNYANYQESQVYGASMEQSTNVQDLNSSQSWEN
MYPGWKYDPNTGQWHQVDSYDTMATDVHHTGSDWGVVNDQKTDVSYLQHAAQPAVETVTE
TSTTESVSNWSQVSQGNNGYPEHMVFDPQYPGWYYDTIAQEWRALDTYTASIQSTAQAHD
QQHQNGFVSTGSFHQNSDSLYGGLVQADNYLQGFGSQGPDGSWTAAYSNDYPQNLNAWPA
ETVPKSEAFATYGNDYQQHLNAWSAETVPENEAFSTLSRNQQLDNSYGSNSSLNINQQKS
LNSFGTVSMYNGASQVHGKANGTVDFNNFIPDGNFSQQFNQANTKLDEQTQFSNNYFDSQ
KPPNLSHQSFESGHRTYAPNAGRSSAGRPPHALVTFGFGGKLIVMKDKSSLSSSSYGSQD
PGGGSISIMNLMEVVMENTDMSSCGLGASGYFRALCQQSFPGPLVGASVGSKELNKWIDE
RITSCESPDVDYKKGELLRLLLSLLKIACQHYGKLRSPFGADTASRENDSPESAVAKLFA
SAKRNGTQFSEYGALSHSLQKLPSEGQIMATASEVQSFLVSGRKKEALQCAQEGQLWGPA
LVLASQLGDQYYVDTVKQMALRQLVAGSPLRTLCLLIAGQPAEVFSSGTTDPGLQGAVSM
HQQPAQSGANFMLDDWEENLAVITANRTKDDELVLIHLGDCLWKERSEITAAHICYLVAE
ANFESYSDSARLCLIGADHWKCPRTYASPEAIQRTELYEYSKVLGNSQFILIPFQPYKLV
YAHMLVEVGKVSDSLKYCQAVWKSLKTVRAPEVETWKQLVLSLEERIRAHQQGGYTANLA
PTKLVGKLLNFFDSTAHRVVGGLPPPAPSVSQGSVPGNEHYPQPTGPRVSTSQSTMAISS
LMPSASMEPISDWTADGNRMTMVNRSVSEPDFGRTPRQVDSSKDMTSSNDQGKASVGSSR
FARFGFGSQLLQKTVGLVLRPRPGRQAKLGEKNKFYYDEKQKRWVEEGVELPAEEASFAP
PPTTAAFQNGMSDYHLKSAMQKEGTPMNQSPYYKTPPSEHNSGIPYGPSSSNQFSARGRM
GVRSRYVDTFNQGGGSPANLFQSPSVPSVKPAVAANAKFFIPTPASSGEQTMEAIAENGQ
EDTAIHEDPSTSTAYDSFQSPIPSSSMSMQRFPSMGSIPGKGVGTNGQASLPPNSRRTAS
WGGSFSDPFSPPNPAETKTLGEALGMPPSTFMPNESSLMRMPMNGGSVGDDLHEVEL
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccattccaggtggaggatcagacggacgaggatttcttcgataaa
ctggtaggcgatgagtttgggcctaccacaaccggatcaaacccccagttcactgacggt
aatgattctgacgacgctaaagcgttctcgaatctgaacatcgctgaggctggaaatgca
tttggggatttgggcggcggcggcgatgatagcatattggaatccgaagcgaaaactgaa
aaggatcgcgtggatggcgctgcaaagtcgttgggtgctcacgctgaagagaggaattca
ttggtttcatcgaattcggttgggtgtgatagtatagtcgagtctagtaatgatgggata
ggatctgaattcacatcggactcgaccatgagcaagagcagtggatccggagggtctggg
gttaaggaggtgggctggaattcttttcacgcgggcttggagcaaaacagcagtaaaggg
ttcggatcgtactcagattttttcaatgatttgggaggggattccggtactttccagggg
gatgtcggcgataacttgactagccaggcaaaaactgtatcggcccatgaggaatttgga
gctaatggtacgaataattctgttaattatgcgaattatcaggagagtcaagtttatggt
gcatcaatggaacaaagtacaaatgtgcaggatttaaatagtagtcagtcctgggaaaat
atgtatccgggatggaagtacgaccccaataccgggcaatggcatcaagtggatagttat
gatacaatggcaactgatgttcatcatacaggaagtgattggggtgttgttaatgatcag
aaaacggatgtttcttacttgcagcacgctgctcagcccgctgtagaaactgtgactgaa
actagcacgaccgagagtgtatctaactggagtcaggtttcccaaggtaataacgggtac
ccggagcatatggtttttgatcctcagtacccaggttggtattatgacacaattgcgcaa
gaatggcgggcattggatacctacactgcctccattcagtcgacggcacaggcccatgat
cagcagcatcaaaatgggtttgtttccactggtagttttcatcagaatagtgatagctta
tatggcgggttagtgcaagctgataattatttacaaggttttggtagccaaggcccagat
ggaagctggactgcggcttatagcaatgattatccgcaaaatttgaatgcgtggccagct
gaaactgttccaaagagtgaggcttttgcgacctatggcaatgattatcagcaacatttg
aatgcatggtcagctgaaactgttccagagaacgaggctttttcgactttgagtagaaac
cagcaattggataattcttatggttccaactcttctttaaacattaaccaacagaagtcc
ttgaattccttcggaacagtttcaatgtacaatggagcaagtcaggttcatggtaaggct
aacggcactgttgatttcaataactttatccctgatgggaactttagccagcagtttaat
caggcaaatacaaaactagatgaacaaacacaattctcgaacaattactttgacagtcag
aaacccccaaatctttcacatcaatcgtttgagagtggccatcggacttatgctcccaat
gctggaagatcatctgctgggcgtcctccacatgccctggtaacttttgggtttggcgga
aaactcattgtaatgaaggataaaagttctctcagtagctcatcgtatggaagccaggat
cctggaggaggctcaatttctataatgaacttgatggaagttgtcatggaaaacactgat
atgtcaagctgtggattgggtgcctctggttattttcgtgctttgtgccaacaatccttt
ccaggtccattggttggtgctagtgttggaagtaaagagttgaacaaatggattgacgag
aggataacaagctgtgaatcacctgatgtggattataaaaaaggtgaactattgaggttg
cttctctctttgcttaaaattgcttgccaacattatggaaaacttcgatctccttttggt
gccgacactgcatcgagggaaaatgattctccagaatcagcagttgctaaactttttgca
tctgccaaaaggaatggtactcaattcagtgagtatggtgctcttagccacagtttgcag
aaattgccttctgaaggacaaataatggcaaccgcttctgaggtacaaagtttcctggtt
tctggtagaaagaaagaggcccttcaatgtgcacaagaaggtcagctgtggggaccggca
cttgtgcttgcttcacagcttggtgatcagtactatgttgatactgtgaagcaaatggcg
cttcgccagctggttgccggatcacctcttcgtactttatgcctgctaattgcagggcaa
cccgcagaagttttttcttcgggcacaactgatcctggtcttcagggtgctgttagtatg
catcaacagcctgcccagagtggagccaattttatgcttgatgactgggaggaaaatttg
gcagtaataactgcaaacagaacaaaggatgatgaacttgtgctcattcatcttggagat
tgcttgtggaaggaaagaagtgagattactgctgcgcacatctgctatttagttgcggaa
gcaaactttgagtcatactcagacagtgccagactctgtttaattggagcagatcactgg
aaatgtcctcgaacctacgctagtccagaggctattcagaggaccgagttatatgaatat
tccaaggtgcttggaaactctcagtttatcctgataccatttcaaccatataagctcgta
tatgcacacatgctagttgaagtggggaaggtttcagactctttgaaatactgtcaagcg
gtatggaagtctttgaagactgttcgagcacctgaagtggaaacatggaaacaattggtt
ctatctcttgaggagaggatcagagcccatcaacagggtggatacactgcaaatttggct
ccgacaaaattagttggcaaattgctcaacttttttgatagtactgcccatcgtgttgtt
gggggcctaccaccacctgcaccatcagtatcacaagggagtgttcctgggaatgaacac
tatccgcagcccaccggccctagagtttcgactagtcagtcaacaatggccatttcatca
ttaatgccttctgcttcaatggagcccataagtgattggacggctgatggtaatagaatg
acaatggttaatagaagtgtttcagagccagactttggtagaactccaagacaggtcgat
tcatcaaaagacatgacctcatcaaatgaccaagggaaagcttcagttgggtcatcacgc
tttgctcgttttggttttggctctcagttgttgcaaaagactgtcgggctagttttaagg
cctcgcccgggtcgacaggctaagctaggtgaaaagaacaaattctattatgatgaaaag
cagaagagatgggtagaggaaggtgtggagctcccagctgaggaagcttcctttgcacca
cctccaacaactgcagccttccagaatggtatgtcagattaccatttgaaatctgcaatg
cagaaagaagggactccaatgaatcagagcccatattataaaactcctccttcagaacat
aattcaggaatcccatatggtccttccagctcaaatcagttttcggctcggggaagaatg
ggtgtacgatcaaggtatgtggacaccttcaaccaaggtggtggaagccccgcaaacttg
ttccagtcaccttctgtgccctctgttaagcctgctgttgctgcaaatgcaaagtttttc
attcccaccccagcatcatcaggtgaacagacaatggaggccatagcagaaaatgggcaa
gaagacactgcaatccatgaagatccttccacatctactgcatatgactcattccagtct
cccataccttcatcatcaatgagcatgcagaggttcccgagtatgggtagcatcccaggc
aagggtgtggggacaaatggccaggcctctctccctcctaactcacgaagaacagcctcc
tggggtggaagcttcagtgatccattcagccctcccaatccggctgaaacaaaaactcta
ggggaagctttgggcatgcccccttccacatttatgccaaatgagtcttctttgatgcgc
atgccaatgaatggtggcagtgttggggatgaccttcatgaagtggaactttga
DBGET
integrated database retrieval system
