Juglans regia (English walnut): 109021932
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Entry
109021932 CDS
T05245
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1-like
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109021932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
109021932
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
109021932
SWR1 complex
109021932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
109021932
NCBI-ProteinID:
XP_018860217
UniProt:
A0A2I4HVR7
LinkDB
All DBs
Position
4:32356145..32371059
Genome browser
AA seq
2066 aa
AA seq
DB search
MASKGPRCKLDHETRAKRQKALEAPKEPLRRKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASRGTVDQATRGEKKMKEEEQRLRKVALNISKDVKKFWMKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDTHKPVQQCTPQDQLSIKYKEVDENDESKS
STADMDEDYGTQSEDESEDDEQTIEEDEALITEEERKEELAALRNEVDLPLEELLKRYTM
KKVSRESSPEKGEDAAEPLGRESTPEMDGDESEPTPMWEGHGKGKGNNLSAVNEIDAIAT
GRPCVESNDGLSVSEKHLLETETCQATDPLEVSGELAKDHFLYDFHDEQEDVDFVLAAGE
EKDDEATLSQEEELAKADSSDPMDEIALLQKESEIPVEELLARYKKGFDDEEVTDDESND
ASALSDNLGDSPAHEGIELKQQAINMDEDVKTGDYRPVVHSPVEEQEAGSLEKTEGRDSE
NKIADAAAAARSAQPTGNTFSTTKVRTKFPFLLRHPLREYQHIGLDWLVTMYEKRLNGIL
ADEMGLGKTIMTISLLAHLAIEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGS
AKERKYKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQT
LLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFSNPISGMVEGQEKV
NKEVVDRLHNVLRPFILRRLKRDVEKQLPMKHEHIIYCRLSKRQRNLYEDFIASTETQAT
LASANFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMGGIDIQLSSSICSMLSPDPFSNV
DLRGLGFLFTHLDFRMTSWEGDELKAIATPSSLIKERIDLYNVEESGSGFKHKKRLHGTN
FFEEIHKAIMEERLREAKERAAAIAWWNSLRCEKKPMYSRTLREIVTIEHPVYDINRLKA
NPLSYIYSSKLADIVLSPVERFQRMLDLVESFMFAIPAARAPPPVSWCSKSGTSVLLHPT
DKQKLSEMLSPLLLPIRPAVVRSQVYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIF
TQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLLQRFNTNPKIFLFILSTRSGGVGI
NLIGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISELTIEENILKKANKKRA
LDDLVIQSGGYNTEFFKKLDPMELFSGHRSPTIKNLQKEKNNNNGNEVSVSNADVEAALK
CAEDEADYMALKKVEEEEAVDNQEFTEEAIGRLEDDDFVNEDDLKVDEPVDLGGWITTSN
KETGVTLNGSNPSEERTPAHTSKEDDVDMLADVKQMAAAAAAAGQAISSFENQLRPIDRY
AIRFLEFWDPIIDKAAVESQARFEETEWELDRLERYKEEMEAEIDEDEEPLIYERWDSDF
ATEAYRQQVEALAQHQLMAELECEAKEKEDAEDDKCDSTKNEMPGDPKIKSKKKPKKAKF
KSLKKGSLASELKPAKEETSSESISMDDEIICHEVVTSSEIVSPISRVQKKRKNAESALN
VEEGKTLKKKSKKLKKPPTEQCPSDLDSKLLGMRHDERLYSRPCDSLADIEQKPASRSRM
GGKVSITTMPVKRVITIKPEKLKKANIWSRECVPSPDFWLPQEDAILCAVVHEYGPHWSL
VSETLYGMTAGGSYRGRYRHPVHCCERFRELIQRYVLSAPDNPNTEKVSSTGSGKALLKV
TEDNIRLLLDVAAEQPDTELLLQKHLTALLSSVWKVTSRIDCRPSLSSSSNGLYFGGRFF
TYSVSQISQNSTREPVERMKFTNLGQSRKMLAAALHDVYHRQPDGRVSLPNQGSDMSAIT
EQLEITLEFQKEMVDSMVPLPSVISLSICGEDPPSVIEGTGDDHLKAFRNMAENRCRASA
KACAEDNLGWASSVFPINDVRARSVSKLPSLGKHKLSISDSMKPSKSKFKRTSMEQHGEI
PHLIAEPLLEPLPGAVPSDASVRFDPFQPIILDVGKDNVESNLPTDMDTELSMEMENFEV
VPHLYVPGLISGLEDCPFLPEYTDIG
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaaggtcccaggtgtaagcttgatcatgagacaagagctaagcgtcaaaag
gcacttgaagctcccaaagaacctctacgccgaaaaactcattgggatcatgttttagaa
gagatggtttggttgtcaaaggacttcgagtcagagagaaaatggaaattggctcaagca
aagaaggttgctttaagagcgagcaggggcaccgtagatcaggctactaggggagaaaag
aaaatgaaggaagaggagcagcggttaagaaaagttgcacttaatatctcaaaggacgtg
aagaaattctggatgaaaatagaaaaactggtgctttacaagcatcagatggagcttgat
gagaagaagaaaaaggcacttgataagcaacttgagtttcttttgggccaaactgagagg
tactcaacaatgttagcagaaaatctcgttgatactcataaaccagtgcaacaatgtact
ccacaagatcaactgagtattaaatacaaagaagtggatgaaaatgatgaatctaagtca
agtactgcggatatggatgaagattatggtacacaatctgaagacgagtcggaagatgat
gagcaaacaattgaggaagatgaggccctcataactgaagaagaaagaaaagaagaattg
gcagctttgcgcaatgaagtggatcttccacttgaggagctactcaaacgttataccatg
aagaaagtgagcagagaaagtagtccagaaaagggtgaagatgcagctgaaccacttggc
agagaaagtactccagaaatggatggagatgagtctgaaccaacacccatgtgggaaggt
catggaaagggcaaaggaaataatctttctgctgtcaatgagattgatgccatagccact
ggtcgtccttgtgttgaaagtaatgatgggttatctgtttcagaaaaacatttgttagaa
actgaaacatgtcaagctaccgatccattagaagtttctggggaattggccaaagatcat
tttctatatgattttcatgatgaacaggaagatgttgactttgttcttgctgctggggaa
gaaaaggatgatgaggcaaccttatcgcaggaggaggaactggcaaaagcagattcaagc
gatcccatggatgagattgcattactgcaaaaggagagtgaaatacctgtggaagaattg
cttgcaaggtataaaaagggatttgatgacgaagaagttacagatgatgaatccaatgat
gcatctgctttatcagacaatctcggggattctccagctcatgaaggcattgaacttaag
cagcaggccattaatatggatgaagatgtgaaaactggtgattatcggccagttgtgcat
tctcctgtagaagagcaggaagcgggatcccttgaaaaaacagaaggaagggatagtgag
aataaaattgccgatgcagctgcagctgcaagatcagcacaacccacagggaataccttt
tccacaaccaaagtgcgcactaagttcccatttcttctaaggcatcctcttcgtgagtat
caacatattggcttggattggcttgttacaatgtatgagaaaagactgaatgggattcta
gctgatgaaatggggcttggaaagacgattatgacaatctcccttcttgcacacctagca
attgaaaagggaatatggggccctcatctcattgttgtccccacaagtgttatgctcaat
tgggagactgagtttctgaaatggtgtcctgcttttaagattttaacttattttggaagt
gcaaaagagagaaaatataagaggcaaggctggttgaaaccaaattcgtttcatgtatgc
ataaccacgtacagactggttattcaagattcaaaagttttcaagcgaaagaagtggaaa
tatttgattttagatgaagcccatctgattaaaaactggaagtcacaaagatggcaaact
cttttgaacttcaattcaaaacgacgtattttattaactgggacaccactgcagaatgat
ctcatggaactctggtctctaatgcattttctgatgccccacatctttcaatctcatcag
gaattcaaggattggttcagtaatccaatatcaggaatggttgagggacaggagaaagta
aataaagaagttgttgatcgtcttcataatgtcctccgtcctttcatacttcgtcggttg
aaacgagatgtggagaagcagctgcctatgaaacatgaacatatcatttactgtagactg
tcaaagaggcagcgtaacttgtatgaagactttattgctagcacagaaacacaagctact
cttgccagtgcaaacttttttgggatgatcagtgttatcatgcaacttcgcaaagtttgc
aatcatcctgatttatttgagggtcgtccaattgtcagttcttttgatatgggtggtatt
gacatccaattgagttcttctatttgttcgatgctttcacccgacccattttctaatgta
gaccttaggggtttgggatttttatttactcatcttgattttaggatgacttcttgggaa
ggtgatgaattgaaagccattgctaccccctcaagtttaatcaaggagcgcatcgacttg
tacaatgtagaagaaagtgggtctggatttaaacataaaaaaaggttgcatggaaccaat
ttttttgaagagatccataaggcaatcatggaggagagactgagagaagcaaaggaacgg
gctgctgctattgcgtggtggaattccttgaggtgcgagaagaaacccatgtactcaagg
acactaagggaaattgtaacaatagagcatcctgtttatgatattaatcgtctgaaggcc
aaccctttgtcctacatttactcctcaaagctcgctgacattgtcctctcaccagtggaa
cgcttccaaagaatgttggaccttgttgaaagtttcatgtttgcaataccagctgcacga
gccccgccacccgtttcttggtgcagtaaatcggggacatctgtgcttctgcacccaact
gataagcagaaactttcagaaatgttatcaccccttctattacctataagacctgcagtt
gtccggagtcaagtatatttcccagacaggcgacttatacagtttgactgtggtaaattg
caggagcttgcaattttgctcaggaaattaaaatcagaaggtcatcgagcattaatattc
acccaaatgacgaagatgctcgatatcttggaagctttcattaatttgtatggttacact
tacatgcgtttagatggatccactcagccagaggagaggcagaccttattgcaacgcttt
aatacaaatccaaaaatctttcttttcatcttgtcaactcgtagtgggggtgttggtatc
aacctaattggggcagatactgttatcttttatgacagtgactggaatcctgcaatggat
caacaggcccaggatcgatgccaccggattggacagacacgtgaagttcatatttatcga
ttaatcagtgagctcacaattgaagaaaatattttaaagaaagcaaataaaaaacgtgca
ctcgatgatcttgtaatacaaagtggagggtacaacactgagttcttcaaaaagcttgat
cctatggaacttttctccggtcatcgatcacctaccatcaagaatttgcaaaaggaaaag
aataacaacaatggaaatgaggtttctgtatctaatgcggatgtggaagctgctttgaaa
tgtgctgaggatgaagcagattacatggcattgaagaaagttgaagaagaagaagccgtg
gacaaccaggagtttacagaagaagccattggaaggttggaagatgatgattttgtaaat
gaagatgatctgaaggttgatgagcctgtagatctgggtggctggatcacaacatcaaat
aaagaaactggggtgacattaaatgggagtaatcctagcgaagagagaactcctgctcat
actagtaaagaagatgatgttgacatgctggctgatgtcaaacaaatggcagcagcagca
gcagctgctggacaagcaatctcgtcctttgagaatcagctacgtccaatagatcgatat
gcgattcgttttctagaattttgggatcccattatagacaaggctgcagtagaatctcaa
gctaggtttgaggagacagaatgggaattggaccgccttgagaggtacaaggaggaaatg
gaagctgagattgatgaagatgaggaacccctcatatatgagaggtgggattctgatttt
gctactgaggcttatcggcagcaagttgaggccttggctcaacaccagttaatggcagag
ctggaatgtgaagctaaagagaaggaagatgcggaggatgacaaatgtgattctacaaag
aatgaaatgccaggtgatcccaaaatcaagtcaaaaaagaagccaaagaaagccaagttc
aagtctctgaagaagggatctttagcgtctgaactgaagcctgcgaaagaagagacgtca
tcagaatctatatcaatggatgatgagattatttgtcatgaggtggtcacctcttcagaa
attgtttcaccaatatcacgtgtgcagaaaaaacgtaagaacgccgaatctgctttgaat
gttgaagaaggaaagacgttgaaaaagaagtctaagaaactcaagaagcctcccactgaa
caatgtccttcagatttagattccaaattgttgggtatgcggcatgatgaacgtttatat
tcaagaccatgtgatagtttggctgatattgagcaaaaaccagcaagcaggagtaggatg
ggaggaaaagtatccattacaaccatgccagtaaagcgggtcataacgataaaaccagag
aaactaaagaaggcaaatatttggtcaagagagtgtgttccatctcctgatttttggttg
ccacaggaggatgcaatattatgtgctgtggtacatgaatatggccctcattggagcttg
gttagtgaaactttgtatgggatgactgctggtgggtcttacaggggaagatatcgccat
cctgtccattgttgtgagaggtttagagaactcatccagagatatgttttgtctgcaccc
gacaatcctaataccgaaaaggtcagcagtacaggctctggaaaggctcttctcaaagta
acggaggataacattcgattgcttttagacgttgctgctgagcagccagatacagagtta
ctccttcagaagcacttaactgccctgctttcttctgtctggaaggtgacatcacgtatt
gactgcagaccgagtctctcgtcatccagtaatggtctctattttggtggaaggtttttt
acttattctgttagccagatttctcagaattccacacgggaacctgtagaaaggatgaaa
ttcacaaatttaggtcagagtagaaagatgttagcagctgcactccatgatgtctatcat
agacaaccggatgggagagtctcccttcccaaccaggggagtgacatgtcagccattacc
gaacaattggagattacactggaattccagaaagaaatggtggactccatggttcctttg
ccatctgttatcagtttatcaatatgtggggaagatcctccatctgtaatcgagggtact
ggagatgatcatctaaaagctttcagaaatatggctgagaaccgttgcagggcttctgca
aaagcttgtgctgaagataacctgggatgggcatcttctgtattcccaataaatgacgtc
agggctagatccgtatccaagttaccatcattgggcaagcacaagctctccatatctgac
tcgatgaaaccttcgaaatcaaagtttaaaagaacctcaatggagcagcatggtgagata
ccccaccttattgccgagccactgctggaaccgttgccaggagctgtaccaagtgatgct
agtgtaaggtttgacccgtttcaacctatcatcctggacgttgggaaggacaatgtggaa
agtaatttaccgacagacatggatacggagctttcaatggaaatggagaattttgaggtg
gtaccgcatctatatgttccaggattaatctctggtctcgaggattgtccatttttgcct
gagtatactgacattggctga
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integrated database retrieval system
