Juglans regia (English walnut): 109022124
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Entry
109022124 CDS
T05245
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109022124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jre03032
]
109022124
03400 DNA repair and recombination proteins [BR:
jre03400
]
109022124
DNA replication proteins [BR:
jre03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
109022124
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
109022124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
109022124
NCBI-ProteinID:
XP_035541604
UniProt:
A0A6P9E284
LinkDB
All DBs
Position
15:2466635..2476107
Genome browser
AA seq
988 aa
AA seq
DB search
MMTSKAFKGANVFMSRNLVPPEIFDKLHDALKQNGAEVFLCCDPSRSGPNDYHIISSPDH
EKFQDLRAKKCNLLGPQCVLSCATEHRAFPKQGFACCLAMDGVKVLASGFDADEKAKIEM
LVTSMGGVLHPKASLDVSFVIAKNVLAAKYKWALNILKKPIVTIQWLQQCWNEHRVVPQE
SYRILPFSGLTISLTRIPADERKEIEKLITQNGGTYSADLTKMCTHLISDAPEGDKYKVA
RKWGHIHIVTRKWFNQSVARRACLNEDSYPVLGGSVSSSKNVRSCLTVQHGLDKGVGISQ
SVASSAATDLNLQASRCTEVLESDLEATMSQNVSSAISDPPVFLKGGNFETSTVHPNNET
SLDGFVANDSQSEDSDLYLSDCRILLVGFEVSEMRKLVNMVRSGGGSRYMLFNDRLTHIV
VGSPSESEKKEVRSLAALGVIYVVKAAWLEDCNRDRKEIPVLQRHIAYDLLLPKDSVYST
KGTVTGMAGINQSKDSISHLSMPSDELLGSVNSEIGLPSLERNREERSEICRDSSLKAMT
RQSQVPVVNDKSNSRLSDKNKGRLNMQHDSSAKNGKPSSVFKGRVFCFSNSFPEDRRFEI
VQWVVQGGGKVVDDNERQRVHFIIECHGVIPRPIDDSPTVSVSSHWIRSCLEDECLLDVG
SHILYSPLPCRIPLPGFERFRFCVSQYEEKDRLLLRNLCFVLGAKFSEKLSKKVTHLLCK
FTNGPKYEAACKWGIWSITSDWIYECIRQNEVVALDPFCPKEVTIQDREAGLCTLSQFPT
QAVPVISRDGASQFSSQSQNLGNTQTQCTVSRNDSFKELPKQSSVCNKRARLLENDDQKS
LPLSGVCLRDPICNKNPAGDNISKDNGEVSHAVPDVAAAIEDLLEQTSKIHEQKSPGRTE
CDKGLFSPDYSALGQEHSDTRAVIGLSTHWLNRTGKDDDIGNPSGGACAGIYDGFSETQT
ESQVVGYEEDLSGRQMLIDRVRTRSSLA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgtcgaaggcgttcaagggggccaacgttttcatgtcgcggaacctcgtgccc
ccggagatcttcgacaagcttcacgacgcgctcaagcagaacggcgccgaggtctttctc
tgctgcgacccttcccgctctggccctaatgattaccacatcatctcttcccccgatcac
gagaaatttcaggatcttagagctaaaaagtgcaatttgctaggtcctcaatgtgttctt
tcctgtgcaacagagcatagagcttttcctaaacaagggtttgcttgctgccttgcaatg
gatggtgtcaaagtacttgcatctggtttcgacgcagatgaaaaggcaaaaatagaaatg
ctagtgacatcaatgggaggagtcctgcatcctaaagcatccttggatgtcagctttgtc
attgcgaagaatgttttggctgcaaaatacaagtgggcgttaaatattctgaagaaacca
attgtcacaattcagtggttacagcaatgctggaatgagcatcgtgttgttcctcaagag
tcatacaggattcttcctttttctggattgacaatttccttgaccagaattccagcagat
gagcggaaggagattgagaagcttatcacacaaaatggtggaacatattctgctgacctg
accaaaatgtgcacacatttgatttctgatgctcctgaaggtgacaaatacaaggttgct
cgaaaatggggccacattcatattgtaactcggaaatggtttaatcaatccgttgctaga
agagcatgtttgaatgaggactcctatcctgttctgggtggttctgtatcttcaagtaaa
aatgtaaggagttgcttgacagtgcagcatggcttagacaagggtgttggaatttcacaa
tctgtggcatcctcagcggctacagatctaaatttgcaagcttctcgttgcactgaagtt
ttggagtcagacttggaagccactatgtcacagaatgtttcttctgcaatttcagatcct
cccgtctttcttaaaggggggaatttcgaaacatctactgtgcatcccaataatgaaact
tcccttgatggttttgttgccaatgattctcaatccgaagacagtgatctgtacttatcg
gattgtagaatattacttgttgggtttgaagtttctgaaatgcgtaaactagtcaatatg
gtgcgtagtggtggggggtcccgctatatgttgttcaatgataggttgacacacatagta
gttggatctccttcagagagcgagaaaaaggaggtaaggagccttgcagctctgggtgtc
atttatgtggttaaagccgcctggcttgaagattgtaatcgtgataggaaagaaattcct
gttctgcagagacacattgcctatgatctacttcttccaaaagattctgtctactccaca
aaaggaactgtgacaggaatggccggtataaatcaaagcaaagactccatttctcatcta
agcatgccatccgatgagttactggggagtgtgaactctgaaattggattaccttcattg
gaaagaaacagggaagagaggtcagaaatctgcagagacagttctcttaaagcaatgaca
agacaaagtcaagtccctgttgtgaatgataaaagtaacagtcgactgagtgacaaaaat
aaaggtcgactgaacatgcaacatgattccagtgctaaaaatggaaagccatcaagtgta
ttcaagggaagagtattttgcttttcaaattcctttcctgaagataggagatttgaaatt
gttcaatgggtagttcaaggaggaggaaaggtagtggatgataatgaaagacaaagagtg
cacttcatcattgagtgtcatggtgtgatacccaggcctatagatgattccccaacggtg
tctgtatcaagtcactggatacggtcttgtttggaggatgaatgcttgctggatgttggt
agtcacattctatactctccacttccctgccggattcccttgcctgggtttgagagattt
cgattctgtgtttcacaatatgaggagaaagatagactgctactacggaacttgtgtttt
gttcttggagctaaattttcagaaaaactgagtaaaaaggttacccatttattatgcaaa
ttcacaaatggaccgaagtatgaggctgcttgtaaatgggggatatggtcgatcacatcc
gattggatctatgagtgtatcaggcagaatgaagttgttgctctggatccattttgccca
aaagaagttactattcaagaccgagaagcaggattgtgcaccctgagtcagtttcctaca
caagctgtgccggtaatatccagagatggtgcctcccagttttctagtcaatctcaaaac
ctaggaaacacacaaacccagtgtactgttagtagaaatgacagctttaaggaattgcct
aaacaatcaagtgtttgcaacaaaagggcaaggcttttggaaaatgatgaccaaaagagt
ctgcctctctctggggtatgtttacgtgatcctatctgcaataagaatcccgctggagat
aatatatctaaagataatggggaagtatcacatgctgttcctgatgtggctgctgctatt
gaggacttgttggagcagactagtaagattcatgagcagaaatctccagggaggactgaa
tgtgataaaggtcttttctcacctgattattcagcccttggccaagaacattcagatact
cgtgctgtaattgggttatctacacactggttaaacaggactgggaaagatgatgacatc
ggcaatccttctggaggtgcatgtgcaggaatatatgacggttttagtgaaacacaaacg
gagtctcaggttgtcggttatgaagaagatttgtcaggcaggcagatgcttatagacaga
gttcggacgcgaagtagcctggcttga
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