Juglans regia (English walnut): 118349255
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Entry
118349255 CDS
T05245
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118349255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
118349255
Spliceosome [BR:
jre03041
]
Common components
Common spliceosomal components
SR proteins
118349255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
RRM_YTH1
RRM_DME
Motif
Other DBs
NCBI-GeneID:
118349255
NCBI-ProteinID:
XP_035548975
UniProt:
A0A2I4E2F3
LinkDB
All DBs
Position
8:11471847..11479815
Genome browser
AA seq
304 aa
AA seq
DB search
MSSRASRTLYVGNLPADIREREVEDLFHKYGRVAHIDLKVPPRPPGYAFVEFEDAQDAED
AIRGRDGYDFDGHRLRVELAHGGRGHPSSRDRYSSHSNGRGGRGGVSRRSEFRVLITGLP
SSASWQDLKDHMRQAGDVCFSQVFRENGGTTGIVDYTNYEDMKYAVKKLDDSEFRNAFSR
GYVRVREYDSKRDASRSPSRGRSYSRGRSYSRSRSRSISRGRSKSKSPKAKSSHRSPARL
QSRSASRSHSRSRPGSRSRSMSGSRSRSRSPVPAREKNKSKSPKRRSTSRSPSRSRSKSK
SVSR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgtgcgagccgaactctctatgtcggcaatcttcctgccgatattcgcgag
agagaagtggaggatttgtttcacaagtatggacgcgtagcccacattgatctgaaggta
ccaccaaggcccccaggttatgcatttgttgagtttgaagatgctcaagacgctgaagat
gctattcgtggtcgtgatggctatgattttgacgggcatcggctacgtgtggaacttgca
catggtggccgtggacatccatcatcaagagatcgttatagtagtcatagcaatggtcgt
ggtggacgtggtggagtatccaggcgctctgaatttcgtgtgcttatcactggattgcct
tcttctgcttcatggcaagaccttaaggaccacatgcgacaagctggggatgtttgtttt
tcccaagttttccgtgagaacggtggcacaacagggattgtggattacacaaactatgaa
gacatgaagtatgcagtaaaaaaacttgatgactctgagtttcggaatgcattttctcgg
ggatatgttcgtgttagggaatatgattcaaagagggatgcctctaggagccctagtcgt
ggtcgatcttattcaagaggcaggagctatagccgcagtcgtagccgaagtattagtcgg
ggcaggagcaagagcaagtctccaaaagccaaatcttctcaccgttcgcctgctagattg
cagtcgaggtctgcttctcgatctcactctcgttctcggcctggttcaaggtcccgttct
atgtcaggatcccgctcaagatccagatctccagtgcctgcgcgtgagaaaaataagagt
aaaagcccaaagagacgcagtacaagcaggagcccaagcaggagcaggagcaagagcaag
agcgtatccaggtga
DBGET
integrated database retrieval system
