Juglans regia (English walnut): 26380809
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Entry
26380809 CDS
T05245
Symbol
rpoA, AT063_gp033
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
26380809 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
26380809 (rpoA)
03400 DNA repair and recombination proteins [BR:
jre03400
]
26380809 (rpoA)
Enzymes [BR:
jre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
26380809 (rpoA)
Transcription machinery [BR:
jre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
26380809 (rpoA)
DNA repair and recombination proteins [BR:
jre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
26380809 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
26380809
NCBI-ProteinID:
YP_009186200
UniProt:
A0A0S2MA22
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All DBs
Position
Pltd:complement(83766..84752)
Genome browser
AA seq
328 aa
AA seq
DB search
MVREKVIVSTRTLQWKCVESRADSNRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSEKIPHEYSTIVGIQESVHEILMNLKEIVLRSNLYGIRGASICVKGPRSITAQD
IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIRTPNNSQDGSYPIDAVFMPVR
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALHEASRHLIELFIPFLHAKEEKFNLE
NKQHKVTLPLFTFHDRLAKLKKNQKEIALKSIFIDQSELPPRIYNCLKRSNIHTLLDLLN
KSQDDLMKIQHFHIEDIKHILDILEIEK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtaatagtatcgactcggacactacaatggaagtgtgttgaatca
agagcagatagtaatcgtctatattatggacgctttattctgtctccacttatgaaaggt
caagctgatacaataggcattgcaatgcgaagagctttgcttggagaaatagaaggaaca
tgtatcacacgcgcaaaatctgagaaaataccacatgaatattcgaccatagtgggtatt
caagaatcagtacatgagattttaatgaatttgaaagaaattgtattgagaagtaatctg
tatggaattcgtggtgcgtctatttgtgtcaagggtccccgatctataactgctcaagac
atcatcttaccaccttctgtggaaattgttgataatacacagcatatagctaacctaacg
gaaccaattaatttgtgtattgaattacaaatcgagaggaatcgcggatatcgtataaga
acaccaaataactctcaagacggaagttatcctatagacgctgtattcatgcctgttcga
aatgcaaaccatagtattcattcttatgtaaatgggaatgaaaaacaagagatacttttt
ctcgaaatatggacaaatggaagtttaactcctaaagaagcacttcatgaagcctcacgt
catttgattgagttatttattccttttttacatgcgaaagaagaaaaattcaatttagaa
aacaagcaacacaaagttactttacccctttttacttttcatgatagattggctaaacta
aagaaaaatcaaaaagaaatagcattgaaatctatttttatagaccaatcagaattgcct
cctaggatttataattgcctcaaaaggtccaatatacataccctattggatcttttaaat
aaaagtcaagacgatcttatgaaaattcaacattttcacatcgaagacataaaacatata
ttggacattctagaaatagaaaaatag
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