Janthinobacterium rivuli: P9875_01105
Help
Entry
P9875_01105 CDS
T09016
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
jri
Janthinobacterium rivuli
Pathway
jri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P9875_01105 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jri03400
]
P9875_01105 (ung)
Enzymes [BR:
jri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
P9875_01105 (ung)
DNA repair and recombination proteins [BR:
jri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P9875_01105 (ung)
Prokaryotic type
P9875_01105 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WFR79798
LinkDB
All DBs
Position
complement(263304..263972)
Genome browser
AA seq
222 aa
AA seq
DB search
MDVRIDASWKARLEGEFAQPYWERLAAFVKQEYAAGPCFPPGKTIFRAFDLTPFGQVKVV
ILGQDPYHTPGAAMGLCFSIPDGTPPQPSLQNIFKELHSDVGVARTRTDLSDWAEQGVFL
LNSVLTVRAGAAGSHAGKGWEKLTDSAIRHLSAEREHLVFILWGGYAQAKRTLIDPGKHL
VLAAPHPSPLSASKGFFGSKPFSQANAYLQAHGQAPIAWGDG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggacgtacgcatcgacgcatcgtggaaggcgcggctggagggcgagtttgcccagccc
tactgggaacgcctggccgccttcgtgaaacaagagtatgcggcggggccgtgttttccg
ccgggtaaaaccatcttccgcgcgttcgacctgacgccgttcgggcaagtcaaggtcgtg
atcctggggcaagacccgtatcacacgcccggcgcggccatgggcctgtgcttttccatc
cccgatggcacaccgccgcagcccagcctgcaaaatattttcaaggaattgcatagcgac
gtgggcgtggcgcgcacgcgcacggatttgtccgactgggccgaacaaggcgtgttcctg
ctcaacagcgtgttgacggtacgcgccggggcggccggctcgcacgcgggcaaggggtgg
gagaaattgacggacagcgccatccgccacctgtccgccgagcgcgagcacctggtgttc
atcctgtggggcggctatgcgcaagccaagcgcaccttgatcgatcccggcaagcacctg
gtgctggcggcgccgcacccttcacccttgtcggccagcaaaggtttctttggaagcaag
ccgttcagccaggcgaatgcgtatttgcaggcgcatggccaggcgcccatcgcctggggt
gatggctga
DBGET
integrated database retrieval system
