Janthinobacterium rivuli: P9875_02735
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Entry
P9875_02735 CDS
T09016
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
jri
Janthinobacterium rivuli
Pathway
jri00300
Lysine biosynthesis
jri00470
D-Amino acid metabolism
jri01100
Metabolic pathways
jri01110
Biosynthesis of secondary metabolites
jri01120
Microbial metabolism in diverse environments
jri01230
Biosynthesis of amino acids
Module
jri_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P9875_02735 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P9875_02735 (dapF)
Enzymes [BR:
jri01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
P9875_02735 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WFR80114
UniProt:
A0ABY8I5D7
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All DBs
Position
complement(609536..610399)
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AA seq
287 aa
AA seq
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MKLHFTKMHGAGNDFIVIDAIHQEIDFTPAQWQRLADRRFGIGADQILVVEKPRLPGCDF
RYRIYNNDGGEVEQCGNGARAFVKFVSEKGLSTKDSIRVETMAGIIAPRLELDGSITVDM
GAPVLEPALVPFDANGLDGVAQGNDTVWPLDLALPDQPSPVLVSVVSMGNPHAVQVVDDV
DAQDLEVTGPRIEHHPRFPRRVNAGYMQVVDRQHVKLRVFERGAGETLACGTGACAAAVA
GILRGLLDSPVRISARGGELSIAWQGPGQPVLMTGPAVTVFEGTIEL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccactttaccaaaatgcatggcgccggcaatgacttcatcgtcatcgacgcc
atccatcaagagatcgacttcacgccggcccagtggcagcgcctggccgaccgccgtttc
ggcatcggcgccgaccagatcctcgtcgtggaaaagccgcgcctgcccggctgcgacttc
cgctaccgcatctataacaacgatggcggcgaagtcgagcaatgcggcaacggcgcgcgc
gccttcgtcaagttcgtcagcgaaaaggggctatcgaccaaggacagcatccgcgtggaa
accatggccggcatcatcgcgccgcgcctggaacttgacggcagcatcacggtcgacatg
ggcgcgcccgtgctcgaacccgcgctggtgcccttcgatgccaacggcctggacggtgta
gcgcaaggcaacgacactgtctggccgctggacctggccttgccggaccaaccctctccc
gtgctggtgtccgtcgtctcgatgggcaacccgcacgccgtgcaagtggtcgacgatgtc
gatgcgcaagacctggaagtgacgggcccgcgcatcgagcaccatccgcgctttccccgc
agggtcaacgccggctacatgcaggtcgtcgaccgccagcacgtgaaactgcgcgtgttt
gaacggggcgcgggcgaaaccctggcgtgcggcacgggcgcctgcgccgccgccgtggcc
ggcatcctgcgcggcttgctcgactcccccgtgcgcatcagcgcgcgcggcggcgaactg
tcgatcgcctggcaaggccccggccagcccgtcctgatgacgggtccggccgtgaccgtg
ttcgaaggcacgatcgaactgtaa
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