Janthinobacterium rivuli: P9875_03560
Help
Entry
P9875_03560 CDS
T09016
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jri
Janthinobacterium rivuli
Pathway
jri02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P9875_03560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jri03021
]
P9875_03560
Transcription machinery [BR:
jri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9875_03560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
Sigma70_ECF
HTH_28
HTH_38
HTH_17
TnsD
HTH_3
HTH_31
HTH_Tnp_4
PCI
HTH_11
HTH_SB
GerE
HTH_24
HTH_40
Motif
Other DBs
NCBI-ProteinID:
WFR80266
UniProt:
A0ABY8I5T9
LinkDB
All DBs
Position
796656..797174
Genome browser
AA seq
172 aa
AA seq
DB search
MSTAELALQQQVSSLYTDHHHWLRGLLRRKLGNAFDAADLAHDVYLHLMKTGRVPPAGES
RRHLTQIANGMVIDLYRRRQIETAYLEVLALVPEALAPSEEERALVIEALTEIDAVLHQL
PAKARKALLLCKLDGLSYRDIAAELQVSVSSVEKYIAAGLLACYQAMHAQVA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgccgagttagcgcttcagcagcaagtcagcagtctgtacaccgaccaccat
cactggctgcgtggcttgctgcgccgtaaactcggcaatgccttcgatgcggccgacctg
gcgcacgacgtgtacctgcacctgatgaagacgggcagggtgccgccggccggggagtcg
cgccgccacctgacgcagatcgccaatggcatggtcatcgacctgtaccgccgccgccag
atcgaaacggcctacctggaagtgctggccctggtgcccgaagcgttggcgccgtccgag
gaagagcgcgcgctggtgatcgaggcgctgacggaaatcgatgccgtgctgcaccagctg
cccgccaaggcgcgcaaggccttgctgctgtgcaaactcgatggcctgagctaccgtgac
atcgccgccgaactgcaggtgtccgtttcgtccgtcgaaaaatacatcgccgccggtttg
ctggcctgctaccaggccatgcacgcccaggtagcctga
DBGET
integrated database retrieval system
