Janthinobacterium rivuli: P9875_04080
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Entry
P9875_04080 CDS
T09016
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
jri
Janthinobacterium rivuli
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jri02000
]
P9875_04080
Transporters [BR:
jri02000
]
Other transporters
Pores ion channels [TC:
1
]
P9875_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
QCR10
Motif
Other DBs
NCBI-ProteinID:
WFR80365
LinkDB
All DBs
Position
complement(900950..905374)
Genome browser
AA seq
1474 aa
AA seq
DB search
MSDMTTESPGAVPPPPAKKPRRWVRYTLIAIASLAVLLGGAFWFLGRESTLQMLVQKVAS
ASGGDIEVSGVSGSLYNRMHLGHVSYRSKTQHITADNIDINWSPFQFFSEGIAISELHVA
SLSVESTAPSEEPSTMPASLAAPFKIGIADARLDKVTLVSAGGNTVFEKIHFTLSGDKTQ
WQLEDASALTPFGQATASATIAATQPFKLSGKAGLTQLKAAAGEKPAALALQLGGDLNVL
NVTAKGSAGAATADAQLALAPFDPVIILRSANIRGRNINPGKFDATLPQADLSLELDAAI
DTRPTKQTVSGKLAILNHATPGPIDQQKLPLRQFEARLGGTLTATTLESAIIDFGNAGKF
TGSGKLNRDAVDAPIGNAQLTLHTDKIDLQHMYSSINSTKIVGDIVLDSDGKTQTLRAKL
GEAKLRLDVEATLADSLVQLRKATLQAGKSSVNATGQISLKDEQPFKAVASTSRLNPADF
GAFPVADLNLDVRASGHVAPQWLANADFTVRPSKLLDQPLSGKGKLTADAAHFSGIDVQL
ALGKNNVTAKGNFGGAGEKLNWNVDARQLSALQGDLLGSVLASGVVQGTLQQPRTSFVAD
AKGLGLTSGKRPAADSAIHASGDVGLTGPKQTAELKMTGSLQKINPAAFGASLPNGNVNA
DFNGNGRLSGDWQVALNLALRESTLQNAPLAGYAKLSANAKRIDSVDTELRLGPNSLLAK
GALGGATDKLTWKLDAPQLSTLGPRFAGVLQAAGSVSGKMDAPAAQLTLDGRDLTFFGDQ
QLKSIKGSASVGAGQGALDPMVSSLDITGYSTPTFKLASARLGTTGTRGSHTVNLAARND
DFDANVQIRGSQSGASWTGTIDSLQNKGRYALVLQAPVPVKVAGPAGSGVAGLGQPEQIS
VGNTVIKLPAGSITMQSLVKNGPRWTSSGQAAGVALTYLAQVIPALQANARSDLTLGAQW
SLDMQVPTAKQKDPSLAGMLHIYREKGDVTVGVEQPLALGLRTLDARVDVANQQLRLAVK
LDGARAGQSDINATVQMLGGRISNDSALSLTGTTSIDTLAWLAPLTGQPGLELGGALKVA
LSGSGTIGAPQLNGDINGSKLLVNWADQGLKLRNGVLQAKLAGDQLQLQRLSFDGGDGKV
QADGWVRFANGEASLELKLMADRLQALSRPDRTLILSGNSTLVRNDKRFSFEGKFKANRA
LIELAPQDTPTQSSDVVVLGKEVKGGKEAPTLPLNIDLEFDLGNAFHLRGMGIDADLAGN
VRARVINRAAPRVTGSIKVTSGQYAAYGQKLSIERGLIAFTGAYDNPSLNILAVRKRPEG
EALSETNVEAGVEVRGTAQAPTAKLVSTPSVSDSDKLAWLILGHGAETAAGDEMALLTTA
AGALFGGSGGGLQGKLASSLGLDEVGLSQAQGLESTVVTVGKRLSSRAYLTFEQGTSTAT
SLVKLRYKLNRRITLQFQTGTNNALDVLYTWAFD
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatgactaccgaatcgcccggcgccgtccctccgccgccggcgaaaaaaccg
cgccgctgggtgcgctacacactgatcgccatcgccagcctggccgtgctgctgggcggc
gccttctggttcctgggccgcgaatcgaccttgcagatgctggtgcaaaaagtggccagc
gccagcggcggcgacatcgaagtatcgggcgtgtccggctcgctgtacaaccgcatgcac
ctgggccacgtcagctaccgcagcaagacgcagcacatcacggccgacaatatcgacatc
aactggtcgccgttccagttcttctcggaaggcatcgccatcagcgaactgcacgtggcc
agcctgtccgtggaaagcacggcgccgtccgaggaaccgtcgaccatgcccgccagcctg
gccgcgccgttcaagatcggcattgccgacgcgcgcctggacaaggtgaccctggtcagc
gcgggcggcaacacggtgtttgaaaagatccacttcaccttgtccggcgacaagacgcaa
tggcagctggaagacgcgtcggccctgacgccattcggccaggccacggccagcgcgacg
attgccgccacgcagccattcaaactgtcaggcaaggccggcttgacgcagctcaaggcc
gccgccggcgaaaaaccggccgccctggcgctgcagctgggcggcgacctgaacgtgctg
aacgtgacggccaagggcagcgcgggcgcggccacggccgacgcccagctggcgctggcg
ccgttcgatcccgtcatcatcctgcgctcagccaatatccgtggccgcaacatcaatccg
ggcaagtttgacgccaccttgccgcaggcggacctgagcctggaactcgacgccgccatc
gacacgcggccaaccaagcaaaccgtgtcaggcaagctggccatcctcaaccacgccaca
ccgggccccatcgaccagcaaaagctgccgctgcgccagttcgaagcgcgcctgggcggc
accctgacggccaccacgctcgagtcggccatcattgatttcggcaacgcgggcaaattc
acgggcagcggcaagctcaaccgcgacgctgtcgatgcgcccatcggcaatgcgcaattg
accctgcacacggacaagatcgacttgcagcacatgtacagcagcatcaacagcaccaag
atcgtcggcgacatcgtgctcgacagcgacggcaagacgcaaaccctgcgcgccaaactc
ggtgaagccaagctgcgcctggatgtggaagccaccctggccgattccttggtgcaattg
cgcaaggcgaccttgcaagcaggcaaaagcagcgtcaatgcgacgggccagatcagtctg
aaggatgaacaaccgttcaaggccgtggccagtaccagccgcctgaaccctgccgacttc
ggcgccttccccgtggccgacctgaacctcgacgtgcgcgccagcggccacgtggctccc
cagtggctggcgaatgcggacttcaccgtgcgccccagcaagctgcttgaccagccgttg
tccggcaagggcaagctgacggccgatgcggcccatttcagcggcatcgacgtgcaactg
gcgctgggcaagaacaacgtgacggccaagggcaactttggcggcgccggcgaaaaactc
aactggaacgtcgatgcgcggcaactttccgccttgcagggcgacttgctgggtagcgtg
ctggccagtggcgtggtgcagggcaccctgcagcagccgcgcacgagctttgttgccgat
gcgaaaggattgggcctgaccagcggcaagcgtcccgcagcggacagcgccatccacgcc
agcggcgacgtgggtttgacggggccgaagcagacagcggaactgaaaatgacgggttcc
ctgcaaaagatcaacccggccgcgtttggcgcatcactgcccaacggcaacgtcaatgcg
gatttcaacggcaacggccgcctgagcggcgactggcaagtggccctcaacctggccttg
cgcgaatcgaccctgcaaaatgcgccgctggccggctacgccaaactgtcggccaacgcg
aaacgcatcgacagcgtcgatacggaattgcgcctggggccgaacagcctgctggccaag
ggcgcgctcggtggcgccaccgacaagctcacatggaaactcgatgcgccgcaactgtcg
accctgggcccgcgctttgccggcgtgctgcaggcagccggctccgtctcgggcaagatg
gatgcaccggcagcgcaactgacgctcgatggccgtgacctgaccttctttggcgaccag
caactgaaatccatcaaaggcagcgccagcgtgggcgccggccaaggcgcgctcgacccc
atggtcagcagcctggacatcacgggctacagcacgcccaccttcaagctggccagcgcc
cgcctgggcacgacgggcacgcgcggcagccatacggtgaacctggcggcgcgcaacgac
gatttcgacgccaacgtgcaaatccgcggcagccagagcggcgccagctggacgggcacc
atcgacagcctgcaaaacaagggccgctatgcgctcgtgctgcaagcgcccgtgcccgtc
aaagtggccggtcccgccggcagcggcgtggcgggcctgggccagccggaacagatcagc
gtgggcaacacggtcatcaaattaccggcaggcagcatcaccatgcaaagcctggtcaag
aacggcccccgctggaccagttccggccaggcggccggcgtggcgctgacctatctggcg
caagtgattccggcgctgcaagccaatgcgcgtagcgacctgaccctgggcgcgcaatgg
tcgctcgacatgcaggtgccgacggccaagcagaaagacccatcactggccggcatgctg
cacatctaccgcgaaaaaggcgacgtgacggtgggcgtggaacagccgctggcgctgggc
ttgcgcaccctcgatgcgagagtggacgtggccaaccagcaattgcgcctggccgtgaaa
ctggacggcgcgcgcgcaggccagagcgacatcaatgccaccgtgcaaatgctgggcggg
cgcatcagcaacgacagcgccctctcgctgacgggcaccaccagcatcgatacactggcc
tggctggcgccgctgacgggccagccagggctggaactgggcggcgccttgaaggtggcc
ctgtccggcagcggcaccatcggcgcaccgcaattgaatggcgacatcaacggcagcaag
ctgctggtaaactgggccgaccagggcttgaaattgcgcaatggcgtgctgcaagccaag
ctggccggtgatcaattgcaactgcagcgcctgagctttgacggcggcgatggcaaggtg
caggcagatggctgggtacgctttgcgaatggcgaggcgagcctggaactgaaattgatg
gccgaccgcctgcaggcgctatcgcgccccgatcgcaccttgatcctgtcgggcaacagc
accctggtgcgcaacgacaagcgtttcagcttcgagggcaagttcaaggccaaccgcgcg
ctgatcgaactggcaccgcaggataccccgacgcaaagcagcgacgtggtggtgctgggc
aaggaagtcaagggcggcaaggaagcgcccacactccccctgaatatcgaccttgaattc
gacctgggcaacgccttccacctgcgcggcatgggcattgatgcggacctggccggcaat
gtgcgcgccagagtcatcaaccgcgccgcgccgcgcgtgacgggcagcatcaaggtcacc
agcggccagtacgcggcctacgggcaaaagctgtcgatcgaacggggcttgatcgccttc
acgggcgcctacgataacccgtcgctgaatatcctggccgtgcgcaagcgtcccgaaggc
gaagccttgtcggaaacgaacgtggaagcgggcgtggaagtgcgcggcacggcgcaggcg
ccgacagccaagctggtgtccacgccgagcgtgtcggacagcgacaagctggcctggctg
atcctcggccacggcgcggaaacggcggccggcgatgaaatggccttgctgacgacggcc
gcaggcgccctcttcggcggctccggcggcggcttgcagggcaagctggccagttcgctg
ggactcgatgaggtgggcctgtcgcaggcgcaagggctggaaagcacggtcgtcaccgtc
ggcaagcgcctgtcctcgcgcgcctacctgacgttcgaacaaggcaccagcacggcgacg
agcctggtgaaactccgttataaactgaaccgccgcatcaccttgcaattccagacgggc
acgaacaatgcgctcgacgtgttgtacacgtgggcgtttgattag
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integrated database retrieval system
