KEGG   Janthinobacterium rivuli: P9875_05200
Entry
P9875_05200       CDS       T09016                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
jri  Janthinobacterium rivuli
Pathway
jri03030  DNA replication
jri03410  Base excision repair
jri03420  Nucleotide excision repair
jri03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:jri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    P9875_05200 (polA)
   03410 Base excision repair
    P9875_05200 (polA)
   03420 Nucleotide excision repair
    P9875_05200 (polA)
   03440 Homologous recombination
    P9875_05200 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jri03032]
    P9875_05200 (polA)
   03400 DNA repair and recombination proteins [BR:jri03400]
    P9875_05200 (polA)
Enzymes [BR:jri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     P9875_05200 (polA)
DNA replication proteins [BR:jri03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     P9875_05200 (polA)
DNA repair and recombination proteins [BR:jri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     P9875_05200 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     P9875_05200 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 DUF2167
Other DBs
NCBI-ProteinID: WFR80574
UniProt: A0ABY8I7W9
LinkDB
Position
1150522..1153281
AA seq 919 aa
MQNTLLLVDGSSYLYRAFHALPDLRSPDGYPTGAMHGMVNMLRRLRADFPAAYIACVFDA
KGKTFRDDMYPEYKATRASMPDDLRLQIEPIHEAVRAMGWPILMVDGVEADDVIGTLAVQ
AASAGMNVVVSTGDKDLAQLVNSQVTLINTMSNEKLDEAAVLVKFGVPPNRIIDYLSLIG
DTVDNVPGVSKCGPKTAVKWLTLYDSLEGVMENAAKVGGAVGENLRTALPWLPQARALIT
VKTDCDLSGHMTTIADSLVAKHEDKEALLAFFNRYGFKALLRELGAAPPPMSPVGAPVAG
GAAANTTGDMFADAAPAVEAVYETVLTDEQLDKWIALIDAAALTAVDTETTSLEPMTAQM
VGISLSVAEHAACYIPLAHDYAGAPEQLTREHVLAKLRPWLEDANKPKLGQNLKYDSHIF
ANHGVILRGIAHDTLLESYVFESHKKHDMDSLALRHLNYTTIPFEDVCGKGAKQITFNQV
EVEQAAKYAAEDADVTLRLHNAMWGNVANDEKLTFIYEKIEMPTAVVLQKIERNGVLIDD
ELLNIQSAELAVKILELEKKAYELAEQPFNLGSPKQIGEIFFEKLKLPVVKKTPTGAPST
DEEVLQKLAEDYPLPKVLLEYRGMAKLKSTYTDKLPKMINVTTGRVHTNYAQAVAVTGRL
ASNDPNLQNIPIRSAEGRRIREAFIAPPGSHIVSADYSQIELRIMAHISGDEAMLRAFAD
GIDIHRATAAEIFGVPAAEVQSEQRRYAKVINFGLIYGMSAFGLAGNLGVDRTAAQSYID
RYFARFSGVKQYMEDTRQQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPMQ
GTAADLIKLAMIAVQGWLETDNLQTKMIMQVHDELVLEVPDAELELVKRKLPELMARVAA
LKVPLTAEVGVGKNWDEAH
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgcaaaacaccctgctgttagtcgacggttccagttatctttatcgtgccttccatgcg
ctgcccgacctgcgcagcccggatggctatcccacgggcgccatgcacggcatggtcaac
atgctgcgccgtttgcgcgccgatttcccggccgcctacatcgcctgcgtgttcgatgcc
aaaggtaaaactttccgcgacgacatgtatcccgaatacaaggccacgcgcgcctcgatg
ccggacgacctgcgattgcagatcgaaccgatccacgaagccgtgcgcgccatgggctgg
ccgatcctgatggtcgacggcgtggaagcggacgacgtgatcggcaccttggccgtgcag
gccgctagcgccggcatgaacgtggtggtgtcgactggcgacaaggatctggcgcagctg
gtcaacagccaggtgaccctgatcaataccatgagcaatgaaaagctcgacgaagcggcc
gtgctggtcaaattcggcgtgccgccgaaccgcatcatcgattacctgtcgctgatcggc
gataccgtggataacgtgcccggcgtgtcgaaatgcggcccgaagacggccgtcaaatgg
ctgaccttgtacgacagcctggaaggcgtgatggaaaacgcggccaaggtgggcggcgcc
gtcggtgaaaacctgcgcacggccctgccatggctgccgcaggcgcgtgccttgatcacc
gtcaagaccgattgcgatttgtccgggcacatgacgacgatcgccgactcgctggtggca
aaacacgaagacaaggaagcgctgctggccttcttcaaccgctacggcttcaaggccctg
ctgcgcgaattgggtgcggcaccgccgccgatgtcgccggtcggtgcgccggttgccggc
ggcgctgctgccaacacgacgggcgacatgtttgccgatgccgcgccagcagtcgaggcc
gtgtatgaaaccgtgctgacggatgagcagctggacaaatggatcgcgctgatcgatgcg
gctgccctgacggctgtcgacacggaaaccacgtcgctggaaccgatgacggcgcaaatg
gtcggcatttccctctcggtggcagagcacgccgcctgctacattccgctggcccacgat
tacgcgggcgcgccggaacagttgacgcgcgaacacgtgctggcgaaactgcgcccgtgg
ctggaagatgccaacaagcccaagctgggccagaacctgaaatacgacagccacatcttc
gccaaccatggcgtgattctgcgcggcatcgcccacgataccttgctcgaatcgtatgtg
ttcgaatcgcacaagaagcacgacatggacagcctggcgctgcgccacctgaactacacg
acgatcccgttcgaggacgtgtgcggcaagggcgccaagcagatcacgttcaaccaggtg
gaagtggagcaggcggcgaaatacgctgccgaagatgcggacgtcaccttgcgcttgcac
aatgccatgtggggcaatgtggcgaacgatgaaaaactgaccttcatctatgaaaagatc
gagatgccgacggccgtggtcttgcaaaagatcgagcgcaacggtgtgctgatcgatgat
gaattgctcaacatccagtcggccgagctggccgtgaaaattctcgagctggaaaagaag
gcgtatgagctggccgagcagccgttcaacctcggttcgcccaagcagatcggcgagatt
ttcttcgagaagctgaaactgccggtggtcaagaaaaccccgacgggcgcgccttcgacg
gacgaggaggtgctgcaaaagctggccgaggattatccgctgccgaaagtgctgctggaa
taccggggcatggccaagctgaaatcgacctataccgataaattgccgaagatgatcaac
gtcaccacgggcagggtgcatacgaactatgcgcaagccgtggccgtgacggggcgactg
gcgtcgaacgacccgaacttgcagaatattcccatccgcagcgcggaagggcgtcgcatc
cgcgaagcgtttattgcgccgccgggcagccacatcgtttcggccgactattcgcagatc
gaattgcgcatcatggcgcatatctctggcgacgaagccatgctgcgcgcatttgccgac
ggcatcgacattcaccgcgccacggccgccgagatctttggcgtgccggccgcggaagtg
cagagcgaacagcgccgctacgccaaggtcatcaacttcggcttgatctacggcatgagc
gcattcggcctggccggcaacctgggtgtggaccgcacggccgcgcaaagctatatcgac
cgatatttcgcccgtttttccggcgtgaaacagtatatggaagacacgcgccagcaagcc
aaggcgcgcggctacgtggaaaccgtgttcggccgccgtttgtggctgccggaaatcaat
tcgccaaacggcccgcgccgccagggtgcggaacgggcggcgatcaatgcgccgatgcag
ggcacggccgccgacctgatcaagctggccatgatcgccgtgcaaggctggctggaaacg
gacaacttgcaaacaaaaatgatcatgcaggtgcacgatgaactggtgctggaagtgccg
gacgcggaactggaactggtcaagcgcaagctgccggaactgatggccagggtggccgcg
ctgaaggtgccgctgacggcggaagtgggagtcggcaagaactgggacgaagcgcattaa

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