Janthinobacterium rivuli: P9875_06040
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Entry
P9875_06040 CDS
T09016
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
jri
Janthinobacterium rivuli
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jri03000
]
P9875_06040
Transcription factors [BR:
jri03000
]
Prokaryotic type
Helix-turn-helix
Other families
P9875_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
AAA_2
HTH_30
PAS_4
HTH_23
HTH_7
Mg_chelatase
AAA
AAA_5
HTH_29
HTH_28
GAF_2
HTH_22
AAA_16
HTH_50
HTH_38
HTH_Tnp_ISL3
sCache_3_3
NUMOD1
Cache_3-Cache_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WFR80731
UniProt:
A0ABY8I733
LinkDB
All DBs
Position
complement(1325856..1327844)
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AA seq
662 aa
AA seq
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MYQPSATYRSAPFSSIADANILPAGQDNVPVIIETSHQRSVAFGLSPTATPDFTPAGKSD
LSLLIEQNRLLHTHALPAMETLYQQIVNTHNMVILTDANGVIVHSLGDDDFLEKANRVAL
QPGVAWSEQSRGTNAIGTAITEKVPTLVHADQHYLAANHFLTCSAAPITDHRGNVIGVLD
VSSDQRSFHKHTMALVRMSALMIENQLFSATFEDAITVHFHARPEFIGTLMEGIASFTPG
GRFLSANKNGLFQLGLSFAALQSHTFSSLFGLPVSALYDHYRTASPGLLNLCMHSGVRVY
GRAQLRLSNSVFQHGFAASTDQSDINAASAQVPAPASHAANAARRLSGLRYLRTGDPQLE
LVIEKVNKVLGRDIPILVMGETGTGKELLAQAIHNDSPRAMGPFIAVNCASIPETLIESE
LFGYEDGAFTGARKKGAIGKILQANGGTLFLDEIGDMPFGLQARLLRVLQERMVTPLGSS
KSITVNVELICATNHNLRERMAKGLFREDLYYRLNGLVVKLPPLRERTDLDTVVKKILAT
EAPDTRYTVAPDILRMFHQHKWPGNFRQLTNLLRTAIVMAGDEHEICLRHMPDDFLDDIE
MTQATAASASTDRMIAAGANLEEMEQSVILKSLDAHGGNVSATARALGVSRNTIYRKVPH
LK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaccgtcagctacttaccgtagcgcaccgttttcgtccatcgcggacgcgaac
attttgccggcaggacaggacaacgtccccgtcatcattgaaacttcccatcagcgctcc
gtcgcctttggcctgtcgcccacggccacgcccgactttacgccggccggcaaatccgac
ctgtccttgctgatcgagcaaaaccgcttgctgcacacgcacgcgctgcccgccatggaa
accctgtaccagcaaatcgtcaacacccacaatatggtgatcttgacggatgccaacggc
gtcatcgtgcattcactgggtgacgatgattttctggaaaaagccaaccgggtcgctttg
caaccgggcgtggcatggtcggaacaaagccgcggcacgaatgccatcggcacggccatc
acggaaaaagtaccgaccctggtccatgcggaccagcattacctggccgccaatcatttc
ctgacctgctccgccgcaccgatcaccgaccaccggggcaacgtcatcggcgtgctggac
gtctcgagcgaccagcgtagtttccacaagcatacgatggccctcgtgcgcatgtcggcg
ctgatgatcgagaaccagctgttttccgccaccttcgaagatgccatcaccgtgcacttc
cacgcgcgccccgaattcatcggcaccttgatggaaggcatcgcctcgttcacgccgggt
ggacggtttttatccgccaacaagaatggcctgttccaactgggcctgtcatttgccgcg
ctgcaatcgcacacattcagttccctgttcggcttgcccgtgtccgccctgtacgaccat
taccgcactgcctcgcccggcttgctgaacctgtgcatgcacagcggcgtgcgcgtgtat
gggcgcgcgcagttgcgcctgtccaatagcgtcttccagcacggctttgctgccagcacc
gaccagagcgatatcaatgccgcatcggcccaggttcccgcgccggccagccatgcggcc
aacgcggcgcgccgcctgtccggcctgcgctatctgcgcacgggcgatccgcagctggaa
ctggtgatcgaaaaggtcaacaaagtattggggcgcgacatccccatcctcgtcatggga
gaaacgggcaccggcaaggaattgctggcgcaagccatccacaacgattcgccacgggcc
atgggaccgttcattgccgtcaattgcgcctcgattccggaaaccctgatcgagtccgaa
ctgttcggctatgaggacggggcgtttacgggtgcgcgcaagaaaggcgccatcggcaag
atcttgcaagccaatggcggcaccctgttcctcgatgaaatcggcgacatgccgtttggc
ttgcaggcacggctgttgcgcgtgttgcaggaacgcatggtcaccccgctgggcagcagc
aaatcgatcaccgtcaatgtggaactcatttgtgccacgaatcacaacttgcgcgaacgc
atggccaaaggactgttccgcgaagatttgtattaccgcctgaatggcctggtggtaaaa
ctgccgccgctgcgcgaacgcacggacctggacacggtcgtaaaaaaaatcctcgcaacg
gaagcgcccgacacgcgctacacggtggcgccggatattctgcgcatgttccaccagcat
aaatggccgggcaatttccgccagttgacgaatctgttgcgcacggccatcgtcatggcg
ggcgacgagcatgaaatctgtctgcgccacatgcccgatgatttcctcgacgatattgag
atgacgcaagcgactgccgccagcgccagcacggaccgcatgatcgcggccggcgccaac
ctggaagaaatggagcaaagcgtcattctcaaatcgctcgatgcccacggtggcaacgtc
tcggccacggcgcgggccctgggcgtgtcccgcaacacgatctatcgcaaggtgccgcat
ctgaaatag
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