Janthinobacterium rivuli: P9875_07150
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Entry
P9875_07150 CDS
T09016
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
jri
Janthinobacterium rivuli
Pathway
jri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
P9875_07150 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jri03400
]
P9875_07150 (sbcB)
Enzymes [BR:
jri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
P9875_07150 (sbcB)
DNA repair and recombination proteins [BR:
jri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
P9875_07150 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P9875_07150 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P9875_07150 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WFR80933
LinkDB
All DBs
Position
complement(1608422..1609870)
Genome browser
AA seq
482 aa
AA seq
DB search
MTNQTFLWHDYETFGAQPRRDRPAQFAAIRTDADLNEIGEPIMLYCQPANDFLPDPQSCL
ITGITPQQCLQLGVPEHQFAATIEAAFSEPGTIGVGYNTIRFDDEVTRFLFWRNLIDPYA
REWKNHCGRWDILDVVRMTHALRPEGMQWPKRDDGQTSFKLEHLSKANGLAHEAAHDALS
DVRATIALARLIKEKQPKLFEFCLALHKKDRVASEMGMHLAAAERQPFLHVSGMFPAERG
CLGVVWPLATHPSNKNEILVWDCAYDPRELFALDADTIRTRLFTRKDAMPEGMTRLPVKS
VHLNKSPMLVGNLKTLSPAMAAQWGIDLDAAKVNAQLAATAPNMDAIWAEVFQRPGANAA
LDVDEDLYNGFVSNDDRRLLESLRRETPAKLATARPSFADERLQELLFRYRARNFPQTLS
EAESLRWEQHRAARLFDGDGGARTIEMLFTEIDVLSESVDERGEEILGELYDYAEMVAPM
RD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccagacctttctttggcacgactacgaaacctttggcgcccagccgcgccgc
gaccgcccggcccagttcgccgccatccgcacggatgccgacctcaacgagatcggcgag
ccgatcatgctgtattgccagcctgccaatgatttcctgcccgacccgcaatcgtgcctg
atcaccggcatcacgccgcaacagtgcttgcagctgggcgtgcccgagcaccagttcgcc
gccaccatcgaagctgccttttcggaaccgggcaccatcggcgtgggctacaacaccatc
cgtttcgacgatgaagtcacgcgtttcctgttctggcgcaatctgatcgacccgtatgcg
cgcgaatggaagaaccattgcggccgctgggacatcctcgacgtggtgcgcatgacgcac
gcgctgcgcccggaaggcatgcaatggccgaagcgcgacgatggccagaccagttttaag
ctggaacacttgagcaaggccaatggcctggcccacgaagcggcgcacgatgcgctgtcc
gacgtgcgcgccaccatcgccctggcgcgcctgatcaaggaaaagcagccgaaactgttc
gaattctgcctggccctgcacaagaaggaccgggtcgccagcgaaatgggcatgcacctg
gccgccgccgaacgccagcccttcctgcacgtgtcgggcatgttccccgccgaacggggc
tgcctgggcgtcgtctggccgctggccacgcatccgagcaacaaaaatgaaatcctcgtc
tgggattgcgcctacgacccgcgcgaactgttcgcgctggacgccgacaccatccgcacg
cgtttatttacacgcaaggatgccatgccggaaggcatgacgcgcctgcccgtgaaaagc
gtgcacctgaacaaatcgcccatgctggtcggcaatctgaaaactttgtcgccggccatg
gccgcgcaatggggcatcgatctggacgcggcgaaggtcaacgcgcagctggccgcgacg
gcgccgaacatggatgccatctgggccgaagtgttccagcgtccgggcgcgaacgccgcg
ctggacgtggatgaggatttgtacaatggtttcgtcagcaacgacgaccgccgcctgctt
gagtccttgcgccgcgaaacgccggccaagctggccacggcccgcccctcgtttgccgac
gagcgcctgcaggaattgctgttccgctaccgcgcccgcaatttcccgcaaaccctgagc
gaagcggaaagcctgcgctgggaacagcaccgcgccgcccgcctgttcgacggtgacggc
ggcgcccgcaccatcgaaatgctgtttacggagatcgacgtgctgtcggaatcggtcgat
gagcggggagaagagattttaggcgagctgtacgactacgcggagatggtggcgcccatg
cgcgactga
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