Janthinobacterium rivuli: P9875_08085
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Entry
P9875_08085 CDS
T09016
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
jri
Janthinobacterium rivuli
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jri03032
]
P9875_08085 (gyrA)
03400 DNA repair and recombination proteins [BR:
jri03400
]
P9875_08085 (gyrA)
Enzymes [BR:
jri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
P9875_08085 (gyrA)
DNA replication proteins [BR:
jri03032
]
Prokaryotic type
DNA Topoisomerases
P9875_08085 (gyrA)
DNA repair and recombination proteins [BR:
jri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P9875_08085 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WFR81114
LinkDB
All DBs
Position
1777639..1780317
Genome browser
AA seq
892 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHEMNNVWN
RPYVKCARVVGETMGKYHPHGDASIYDTLVRMAQDFSLRYMLVDGQGNFGSVDGDGAAAM
RYTECRLDKIASELLADIDKDTVDFQPNYDGKEKEPTVLPTRIPNLLINGSSGIAVGMAT
NIPPHNITEVIDGALHVLRNPECTIDELIELIPAPDFPTAGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEYGKDGGRIAIIVDELPFQVNKKSLLERIAENVRDKKLDGISDIRDESDKS
GMRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLQCFLSHRR
EVVTRRTVFELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKVELMAKAWDSSV
VREMLARTGDGTTPGGIDAYRPENLPKHYGMQTDGLYKLSDDQAQEILQMRLQRLTGLEQ
DKIVNEYKDVMEHIADLLDILAKPERVTVIITDEMTAAKNEYGAGNKDVRRSQIELNATD
LETEDLITPQDMVVTLSHTGYMKAQPITEYRAQKRGGRGKQAMATKEEDWIDQLFIANTH
DYILCFSDRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLQDNEKITVILPLSGENRTFPED
HYVFMSTSLGTVKKTPLKDFSNPRKAGIIAVDLDDGDFLIGAALTDGQHDVMLFSDSGKA
VRFDENDVRPMGRTARGVRGMNLEEGQHVIALLVAENEQQSVLTATENGYGKRTPITEYT
RHGRGTKGMIAIQTSERNGKVVAATLVDTSDEIMLITTGGVLIRTRVSEIREMGRATQGV
TLIAVEDGTKLSGLQRVVETDIDEVELTTEADAAPAPAAVDPVDPVDPAQPE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgcaaaagaaacaattcctatttccctcgaagaagagatgcgcaagagc
tacctcgattacgccatgagcgtgatcgtcggtcgcgccttgcccgatgcgcgcgatggc
ttgaagccagtgcaccgccgcgtcttgttcgcgatgcatgaaatgaataacgtgtggaac
cgcccttacgtcaagtgcgcccgcgtggtcggcgaaaccatgggtaaataccatccccac
ggcgatgcctcgatctacgacacactggtgcgcatggcgcaggatttctcgctgcgctac
atgctcgtcgatggccagggcaacttcggttccgtcgacggcgacggcgccgcggcgatg
cgttacaccgagtgccgcctggacaagatcgccagcgagctgctggccgatatcgacaag
gataccgtcgacttccagcccaactatgacggcaaggaaaaggaaccgacggtcttgccg
acgcgtatcccgaacctgctgatcaatggctcgtccggtatcgccgtcggcatggcgacc
aacattccgccacataacatcaccgaagtcatcgacggcgcgctgcacgtgctgcgcaat
cccgagtgcacgatcgatgaattgatcgagctgatcccggcaccggacttcccgacggcc
ggcatcatctatggcgtgtccggcgtgcgcgacggttaccgcacgggccgcggccgcgtc
gtcatgcgcgccaagacccacttcgaagaatacggcaaggatggcggccgcatcgccatc
atcgtcgacgagctgccattccaggtcaacaagaaatccttgctggaacgtatcgctgaa
aacgtgcgcgacaagaagctcgacggcatttccgacatccgcgacgaatccgacaagtcg
ggcatgcgcgtggtgatcgagctgaaacggggcgaagtgccggaagtggtgttgaacaat
ctgtacaagcagacccagttgcaagacaccttcggcatgaacatggtggccctggtcgat
ggacagccgaagctgctgaacctcaagcagatgctgcaatgcttcctgtcgcaccgccgc
gaagtggtcacgcgccgcaccgtgttcgaactgcgcaaggcgcgcgaacggggccacgta
ctggaaggcctggcggtcgcgctggccaacatcgatgacttcatcgccatcatcaaggcc
gcgccgacgccgccgatcgccaaggtcgagctgatggccaaggcctgggattcgtccgtg
gtgcgcgaaatgctggcccgcacgggcgacggcacgacgccaggcggcatcgatgcctac
cgtccggaaaacctgccgaagcactacggcatgcagacggatggcctgtacaagctgtcg
gacgaccaggcgcaggaaattctgcaaatgcgcctgcagcgcctgaccggcctggaacag
gacaagatcgtcaacgagtacaaggacgtgatggaacatatcgccgacttgctcgacatc
ctggccaagccggaacgcgtgaccgtcatcatcaccgatgaaatgacggccgcgaagaac
gaatacggcgctggcaacaaggacgtgcgccgctcgcagatcgagttgaatgcgaccgac
ctggaaacggaagacctgatcacgccgcaggacatggtcgtgaccctgtcgcacaccggt
tacatgaaggcccagccgatcaccgaataccgcgcgcaaaaacgcggtggacgcggcaag
caggccatggcgacgaaagaggaagactggatcgaccagctgttcatcgccaacacgcac
gactacatcctgtgcttctcggatcgtggccgcatgtactggctgaaggtatgggaagtg
ccgcaaggctcgcgcaattcgcgcggcaagccgatcgtcaacatgttcccgttgcaggac
aacgaaaagatcaccgtgatcctgccgctgtcgggcgagaaccgcacgttcccggaagac
cattatgtcttcatgtcgaccagcctcggtaccgtcaagaaaacgccgctgaaggacttc
agcaatccacgcaaggccggcatcatcgcggtcgacctggacgacggcgacttcctgatc
ggcgcggcgctgaccgacggccagcacgacgtgatgctgttctcggattcgggcaaggca
gtgcgcttcgacgaaaacgatgtgcgtccgatgggccgtacggcgcgcggcgtgcgcggc
atgaacctggaagaaggccagcacgtgatcgccctgctggtggcagagaacgagcagcag
tcggtactgacggccacggaaaacggctacggcaagcgtacgccgatcaccgaatacacg
cgccatggccgtggcacgaaaggcatgatcgccatccagaccagcgagcgcaacggtaaa
gtggttgccgcgaccctggtcgataccagcgatgaaatcatgctgatcaccaccggtggc
gtcttgatccgcacccgcgtgtcggaaatccgcgagatgggccgcgcgacgcagggcgtg
accctgatcgccgtggaagacggcaccaagctgtccggcctgcagcgcgtggtggaaacg
gatatcgacgaagtcgagctgacgacggaggcggacgccgcgcctgcgccggcggcggtc
gacccggttgatccggtcgatccggcccagccggagtaa
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