Janthinobacterium rivuli: P9875_08135
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Entry
P9875_08135 CDS
T09016
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
jri
Janthinobacterium rivuli
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jri03032
]
P9875_08135
03036 Chromosome and associated proteins [BR:
jri03036
]
P9875_08135
03400 DNA repair and recombination proteins [BR:
jri03400
]
P9875_08135
DNA replication proteins [BR:
jri03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
P9875_08135
Chromosome and associated proteins [BR:
jri03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
P9875_08135
DNA repair and recombination proteins [BR:
jri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
P9875_08135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
CATASP
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
WFR81123
LinkDB
All DBs
Position
1789298..1789603
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELINRLAERYSQLVAKDAEYAVKTILDAMTNALATGQRIEIRGFGSFALNSRPPRI
GRNPKSGDKVMVPEKRVPHFKPGKQLRERVDAMVGQPIIED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagtccgagctgatcaaccgcctcgctgagcgttattctcagctggtggcgaaa
gatgcggagtatgccgtcaagaccattctcgatgcgatgaccaacgccctggcgaccggt
cagcgtatcgagatccgcggttttggcagttttgccctgaacagcaggcccccgcgcatc
ggccgcaacccgaaatccggcgacaaggtgatggttcccgaaaaacgggtgccccacttc
aaaccgggcaaacagttgcgcgagcgcgtggacgcgatggtcgggcaaccgattatcgag
gattaa
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integrated database retrieval system
